Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 827 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  370 bits (949), Expect = e-106
 Identities = 229/669 (34%), Positives = 355/669 (53%), Gaps = 67/669 (10%)

Query: 24  LVFSVFQIATAA-------FPLISTQVLRAIHVGFLLLVVYLSY-SFVGHRRPWQPLA-W 74
           + +S+FQ+  A+       F +++    RAIH+GF L + +L+Y +     R   PLA W
Sbjct: 1   MAWSLFQLWYASPLPFVFGFGILNDTEARAIHLGFALFLTFLAYPALKSSPRDRVPLADW 60

Query: 75  LLGLAGMATAAYQWYFEGDLIQRSGELTTSDLIVGLLLIGLVFEAARRVMGIALPIICAL 134
           +LG  G    AY + F G+L  R G+ +T DL+ G   I L+ EA RR +G+ +  +  +
Sbjct: 61  VLGALGAFAGAYLFLFYGELAGRPGQPSTLDLVTGTAGILLLLEATRRALGLPMVFVAGV 120

Query: 135 FLAYGLLGQHLPGELAHRGYGLDQIVNQLAFGTEGLYGTPTYVSATYIYLFILFGAFLEQ 194
           F+ Y   GQ++P  + HRG  L + +N     TEG++G    VS ++++LF+LFG  LE+
Sbjct: 121 FIFYTFAGQYMPDVIQHRGASLVKFINHQWLTTEGVFGIALGVSTSFVFLFVLFGTLLEK 180

Query: 195 AGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGTITGSGVANVVTTGQFTIPLMKRFGY 254
           AG        ++ L GH  GGPAKV+V SSAL G ++GS V+NVV+ G FTIPLMKR G 
Sbjct: 181 AGAGNWMMQISIALLGHLRGGPAKVAVVSSALNGVVSGSSVSNVVSGGIFTIPLMKRTGL 240

Query: 255 KPAFAGGVEATSSMGSQLMPPVMGAVAFIMAETINVPYAEVAKAALIPALLYFGSVYWMV 314
               AG +EA++S+  Q+MPPVMGA AF+M E + +PY+E+ K AL+PA+  + ++ +MV
Sbjct: 241 SGVKAGAIEASASINGQIMPPVMGAAAFLMVEYVGIPYSEIVKHALLPAVFSYIALLYMV 300

Query: 315 HLEARRSHLHGLPREQCPSAWDALRQRWF--------------LLVPLMVLVALLFSGRT 360
           HLEA + ++  +P+   P     +R+RW               LL   ++ +   F    
Sbjct: 301 HLEAVKLNMQPIPQRPTP-----MRERWLRMGLGLAGSVLAICLLYYGIIAIRAAFGESA 355

Query: 361 PLYSGMVGLALTAIVILGS------------AIILRAQKTW------------LRAAFWV 396
           PL   + G+AL    I  S            A IL   + W            +    W 
Sbjct: 356 PLLLAIAGVALYIATIWYSSRYPDLELDDPDAPILELPRAWDVTRTGLDFLIPIVVLLWC 415

Query: 397 ALGILCS---GFFRMGIGVILMVIAGLAIACCF----VQGG-RATLHACVMALAEGARHA 448
            +    S     F   + +I +V     +   F    V G  RA        LA GAR+ 
Sbjct: 416 LMVEQLSPGLSAFWATLTIIAIVATRKPLMAIFRKEDVAGSVRAAAWDLTDGLALGARNM 475

Query: 449 VPVGIACALVGVIIGVISLTGLATTFAGYILDLGRDNLFLSLVLTMLTCLVLGMGIPTIP 508
           + + +A A  G+++G I+LTGL       +  +   N+ + L+L     LVLGMGIPT  
Sbjct: 476 IGIAVATATAGIVVGTITLTGLGLMMTELVEFISGGNVIMMLILIAAISLVLGMGIPTTA 535

Query: 509 NYIITSSIAAPALLELG------VPLIVSHMFVFYFGILADLTPPVALACFAAAPIAKEK 562
           NYI+ +++ AP ++ELG      +PLI  H+FVFYFGI+AD+TPPV LA FAAA I+KE 
Sbjct: 536 NYILVATLMAPVVVELGSQAGLAIPLIAVHLFVFYFGIMADITPPVGLAAFAAAAISKED 595

Query: 563 GLLISFWAVRIALAGFVVPFMAVYDPALMMQG-DSMGSTLYMVIKAAFAVALWGCASIGH 621
            +   F     +L   ++PF+ +++PA+++ G D+   T+++   +  A+ ++  A++  
Sbjct: 596 PIATGFQGALYSLRTAILPFVFIFNPAILLIGVDTWAHTIWVAAISLAAILIFSAATMNW 655

Query: 622 LRAPMPWWE 630
                  WE
Sbjct: 656 FVTKSRLWE 664