Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 427 a.a., TRAP dicarboxylate transporter, DctM subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 80.1 bits (196), Expect = 2e-19
 Identities = 98/420 (23%), Positives = 176/420 (41%), Gaps = 69/420 (16%)

Query: 182 IYLFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGTITGSGVANVVTT 241
           I  FIL G FL   G+ +   +FA  + GH  GG     V + AL   I+GS  A VV  
Sbjct: 59  IPFFILAGNFLTHGGVAKRMINFATAMVGHWYGGLGLGGVVACALFAAISGSSPATVVAI 118

Query: 242 GQFTIPLMKRFGYKPAFAGGVEATSSMGSQLMPPVMGAVAFIMAETINVPYAEVAKAALI 301
           G   +P M + G+   F  GV  TS     L+PP +  V + +A   N     +  A ++
Sbjct: 119 GSILLPAMVKQGFPRRFGAGVITTSGALGILIPPSLVMVMYAVA--TNTSVGALFMAGVV 176

Query: 302 PALLYFGSVYWMVHLEARRSHLHGLPREQCPSAWDALRQRWFLLVPLMVLVALLFSGRTP 361
           P L+    +     + AR+++   LP+    +   A R+  + L+ +++++  ++SG   
Sbjct: 177 PGLVLATLLGVTTSVIARKNNYPRLPKASWATRAKAFREAIWGLMLVVIVIGGIYSG--- 233

Query: 362 LYSGMVGLALTAIVILGSAIILRAQKTWLRAAFWVALGILCSGFFRMGIGVILMVIAGLA 421
           +++     A++A+                  AF +A+ +      R G+  IL+  A ++
Sbjct: 234 IFTPTEAAAMSAVY-----------------AFLIAVFVYKDMPLR-GVVKILLSSASMS 275

Query: 422 IACCFVQGGRATLHACVMALAEGARHAVPVGIACALVGVIIGVISLTGLATTFAGYILDL 481
               ++    A L + V+     A   +P  IA  +VG  +G+++               
Sbjct: 276 AMLLYII-TNAVLFSFVL-----ANENIPQAIADWIVGKELGIVA--------------- 314

Query: 482 GRDNLFLSLVLTMLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFVFYFGIL 541
                FL +V  +L  L  G  +      +I + I  P  ++LG+  +       +FGIL
Sbjct: 315 -----FLLVVNVLL--LAAGNFMEPSSIVLIMAPILFPVAMKLGIDPV-------HFGIL 360

Query: 542 ADLT-------PPVALACFAAAPIAKE--KGLLISFWAVRIALAGFVVPFMAVYDPALMM 592
             +        PPV L  + A+ I K     L ++     + + GF++  +  Y P L +
Sbjct: 361 IIVNMEVGMCHPPVGLNLYVASGITKMGISELTVAVMPWLLTMLGFLI--VVTYWPGLSL 418