Pairwise Alignments

Query, 253 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 261 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

 Score =  129 bits (325), Expect = 5e-35
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 18/257 (7%)

Query: 4   IAVLSVFAFAAGLIDAAVGGGGLIQIPALFNVLPSAQPAALLGSNKLASVCGTAFAARSF 63
           + +L   AF AG IDA  GGGGL+ IPAL        P  +LG+NKL +  G+A A+ +F
Sbjct: 14  LVILFAVAFTAGFIDAIAGGGGLLTIPALLTA--GLPPHLVLGTNKLCATFGSATASYTF 71

Query: 64  IRKVTLDWGLIVPAALSAFVMSFAGAATVSLVPPSVMRPAVLVLIVLMAVYTFCKKDFGT 123
            R+   +  +   A +   + +  GAA    +P S +   + +++    +Y         
Sbjct: 72  YRRRLFEPEMWRRALVGTAIGAALGAALAQFMPASWLNQLLPLVVSACGIYLLFS----- 126

Query: 124 LHTPAQ-------VGRKEQCLAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLHAS 176
            H PA+       +GRK Q    L   ++GFYDG+ GPGTG+F     +  + LD L AS
Sbjct: 127 -HMPAKPSSDALVIGRKRQWPQSL---SLGFYDGVAGPGTGAFWTVSSMLLYPLDLLRAS 182

Query: 177 ASAKVVNIATNLAALVFFVPTGNVLYAIALPMAVCNILGALTGTWLAVRKGAGFVRGLFL 236
             A+ +N  +N  AL  FV  G+V + + + M +  + GA  G   A+R G+ F+R +F+
Sbjct: 183 GVARTMNFVSNAVALSVFVIGGHVAWVLGIGMGLALMAGAYFGARTAIRGGSQFIRPIFI 242

Query: 237 VLLCVLIAKLSWDLLAG 253
           +++  +  +L+W    G
Sbjct: 243 LVVLAMSLRLAWQHWVG 259