Pairwise Alignments

Query, 253 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  140 bits (353), Expect = 3e-38
 Identities = 86/254 (33%), Positives = 136/254 (53%), Gaps = 17/254 (6%)

Query: 4   IAVLSVFAFAAGLIDAAVGGGGLIQIPALFNVLPSAQPAALLGSNKLASVCGTAFAARSF 63
           I VL++ AF AG IDA  GGGG++ +PAL ++     P   LG+NKLA+   ++ AA ++
Sbjct: 10  IMVLALVAFIAGFIDAVAGGGGMLTVPALLSL--GLPPHLALGTNKLAATFASSTAAWTY 67

Query: 64  IRKVTLDWGLIVPAALSAFVMSFAGAATVSLVPPSVMRPAVLVLIVLMAVYTFCKKDFGT 123
            R+   D      A ++  + +  G   V  +    +R  + ++I+  A+YT        
Sbjct: 68  YRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYT-------V 120

Query: 124 LHTPAQVGRK---EQC-----LAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLHA 175
           LH P Q  +    E C       +L G  +GFYDGL GPGTG+F     +  +  + L A
Sbjct: 121 LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA 180

Query: 176 SASAKVVNIATNLAALVFFVPTGNVLYAIALPMAVCNILGALTGTWLAVRKGAGFVRGLF 235
           S  AK +N+ +N  +LV F   G++ + + L M VC + GA  G   A+R GA F+R LF
Sbjct: 181 SGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLF 240

Query: 236 LVLLCVLIAKLSWD 249
           ++++ +L  KL++D
Sbjct: 241 ILVVTILAGKLAYD 254