Pairwise Alignments

Query, 465 a.a., putative Phage DNA helicase from Pseudomonas putida KT2440

Subject, 517 a.a., DNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  180 bits (456), Expect = 1e-49
 Identities = 134/451 (29%), Positives = 228/451 (50%), Gaps = 41/451 (9%)

Query: 9   AEEAEFGVIGSLMHQPSLIETIGAKISPMHFHQQDAAELFSMILAARSAGRPADPVSLAD 68
           A E E  V+G+LM +      +   + P  F++     +++ I       +P D   +  
Sbjct: 29  APELEEAVLGALMIEKDAYSLVSEILRPESFYEHRHQLIYAAITDLAVNQKPVD---ILT 85

Query: 69  IRPTLSN-GEMTLVRA----AEIMRNTVSVANANEYARIVVERSKARVVNDLGQTIINLA 123
           ++  LS  GE+  V       ++     S A+   +ARI+ ++S AR +      I + A
Sbjct: 86  VKEQLSKRGELEEVGGPFYITQLSSKVASSAHIEYHARIIAQKSLARELITFTSNIQSKA 145

Query: 124 -SQARPIAQIIAEVQEAALSLNSEDDEPDVITLAEALGPVIDE---MDDRFNGR--GING 177
             +   +  ++ E +     ++ ++ + D   +     PVIDE   +  +   R  G++G
Sbjct: 146 FDETLDVDDLMQEAEGKLFEISQQNMKKDYTQI----NPVIDEAYKLIQKAAARTDGLSG 201

Query: 178 LSTGLPDLDDLIQGLRGSHVIIVAGRPGTGKTTLGLGIAEYLTIRESKSALVFSLEMAGK 237
           L +G   LD +  G + S +II+A RP  GKT   L +A+ + +       +FSLEM+  
Sbjct: 202 LESGFTKLDKMTSGWQNSDLIIIAARPAMGKTAFVLSMAKNIAVDYRNPVALFSLEMSNV 261

Query: 238 ELAKRSLASASSVTTGNIDTGKAMADGEKIQKITAAVGRMRDADLRICQKGGLPLSRIRN 297
           +L  R + +   + +  I +G+  +   + Q++   +  + DA L +     L +  +R 
Sbjct: 262 QLVNRLITNVCEIPSEKIKSGQLAS--YEWQQLDYKLKDLLDAPLYVDDTPSLSVFELRT 319

Query: 298 IARFQHKAKPLDLIVIDYIGLIAPEP---GSRQQNRNLELGAISRGIKAMAKELDVPVIV 354
            AR   +   + +I+IDY+ L+       GSRQ+    E+  ISR +K +AKEL++P+I 
Sbjct: 320 KARRLVREHGVRIIIIDYLQLMNASGMAFGSRQE----EVSTISRSLKGLAKELNIPIIA 375

Query: 355 LAQLNRGIETR---TAKKPQMSDLRDSGEIEQDADIILIAHR---------DADSDLGQS 402
           L+QLNRG+E+R     K+PQ+SDLR+SG IEQDAD++   HR         D  +DL   
Sbjct: 376 LSQLNRGVESREGIDGKRPQLSDLRESGAIEQDADMVCFIHRPEYYKIYQDDRGNDL--R 433

Query: 403 GVTEIDVVKHRHAPVGHCLLQHQGEFARFAN 433
           G+ EI + KHR+  VG  LL+ +GEF RF+N
Sbjct: 434 GMAEIVIAKHRNGAVGEVLLRFKGEFTRFSN 464