Pairwise Alignments

Query, 369 a.a., putative Phage tail protein from Pseudomonas putida KT2440

Subject, 359 a.a., prophage MuSo2, 43 kDa tail protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  165 bits (418), Expect = 2e-45
 Identities = 110/338 (32%), Positives = 168/338 (49%), Gaps = 11/338 (3%)

Query: 7   VTLSVGGHDYAGWKEVSISAGLERQARDFSVGITWKWPGGGDMPVR-----IQQGEAVEV 61
           + L  GG  Y GW ++ I+  LE  +  F + +T+K+ G  D   +     I+QG+A  V
Sbjct: 5   IVLKAGGKIYQGWTKIGITRSLEAMSGAFDLEMTYKFLGN-DAQYKAFIEPIKQGQACTV 63

Query: 62  RIGDDLVLTGYVFSTPIRYDAHTINLSIAGRSKTADLVDCAAINSPGQWRGQSVQKIVEA 121
            IG + V+TGYV      YD  TI +S++GR KTADLVDC+     GQ+  Q++ +I + 
Sbjct: 64  DIGGERVITGYVDDWVPSYDESTITISVSGRDKTADLVDCSIDYPSGQFNNQTLTQIADI 123

Query: 122 LAGEYGIKVVNEATTTLGLDDHTIEPGETAFESIDRLLTLSRLFSTDDGRGRLVIATPGT 181
           +   +GIKV+             IE GET  E + RL     +  T D  G LVI T  +
Sbjct: 124 VCKPFGIKVIVNTDVGEPFQRIQIEQGETPHELLARLAKQRGVLLTSDTFGNLVI-TRAS 182

Query: 182 AGRAVDTLELGKNILTGDTNLDFSNVFSEYI--SRGQRSGT-DTMFGTAASEVEAKLADD 238
             +A  +L LG N+        +   FS++   + G   G  D+        ++A + D 
Sbjct: 183 KTKAGVSLILGDNVKAARGRFSWRQRFSKFTIKAAGAAHGQWDSAGLPTVGGIKADVTDS 242

Query: 239 RVARRRVKVINQSGQMTPAMARARVEWERANAISRAMTLNYTVQGWR-QSNGALWRHNMI 297
            + R R  +I      T   A  R +WER  +I ++    YTV GWR    G LW  N +
Sbjct: 243 EIGRYRPLIIVNEEVTTAEGAAKRGQWERQRSIGKSNMAEYTVTGWRIPQTGKLWNINTL 302

Query: 298 VRVLDPLIGLDRDMLISEINYELGESGTVCKVTVAPPD 335
           V V+D ++GLD +MLI+ I +   ++G +  ++V  PD
Sbjct: 303 VPVIDEIMGLDEEMLIASILFSEDDAGRLAVISVVRPD 340