Pairwise Alignments

Query, 386 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 801 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  192 bits (488), Expect = 3e-53
 Identities = 114/290 (39%), Positives = 174/290 (60%), Gaps = 13/290 (4%)

Query: 93  WRVRKDGTQFWALAALDVIRDESGQIIGLAKVTRDITDRRETAQQLDAVRAQLFQAQKLE 152
           W +  DG + ++ A     RD + +I  + K+     + R   Q+ + V A L Q Q+LE
Sbjct: 372 WSLVADGGRIYSAA-----RDITSEIAAVDKLAEANRELRAQIQERERVEATLQQMQRLE 426

Query: 153 ALGQLTGGLAHDFNNMLTIIISSARLA---LATQDPA-RTQRMLQHILDASQRGTELTQQ 208
           A+GQLT G+AHDFNN+LT+I++SA      L    PA R+ R LQ+I ++ +RG  LT Q
Sbjct: 427 AVGQLTAGVAHDFNNLLTVILTSASFLQNDLEQGAPAERSLRRLQYIRESGERGATLTSQ 486

Query: 209 LLSFARHRKFDVASVAPAELVNATRGLLEHALPSSIDLKVLLQPDLPLIEVDAGQLQMVL 268
           LL+FAR ++    ++   + + +   LL+  L  S+ ++   Q ++    VD  Q++M++
Sbjct: 487 LLAFARRQQLTPTAIDLNDTLVSLLSLLKSTLGGSVSIETDTQANIWHALVDPTQIEMII 546

Query: 269 LNLLFNARDAIDGHGRISL---TVDVVELFGEVEGLK-GSFVRFEVEDSGEGIPTEILPR 324
           LNL  NARDA+   GR++L    V + E     E    G +V   V D+G G+  E+L +
Sbjct: 547 LNLAINARDAMGDSGRLTLGTRNVVITEPALRAEDPSPGEYVVLSVTDTGTGMSEEVLSK 606

Query: 325 IFEPFFTTKPFGKGTGLGLSQVYGFARQSGGAICVDSEPGRGTCMRLYLP 374
            FEPFFTTK  GKG+GLGL+QV+GFA+QSGG   ++S PG GT ++++LP
Sbjct: 607 AFEPFFTTKEVGKGSGLGLAQVFGFAKQSGGGARIESRPGAGTTVKVFLP 656