Pairwise Alignments

Query, 386 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 1067 a.a., PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  185 bits (470), Expect = 5e-51
 Identities = 136/379 (35%), Positives = 199/379 (52%), Gaps = 39/379 (10%)

Query: 37  HVVSWNAGAQRIKGYRRDEVIGKHFSLFFTPQDCADGRPERLLCQALE-QGVAQDEGWRV 95
           H+ + N   + + G+    ++G   SL   P D     P     +A+E QG       R+
Sbjct: 411 HIKAVNPAWETLLGHDERLLVGAPMSLLVHPDD---REPSTAALRAMEPQGPPLRFENRL 467

Query: 96  R-KDGTQFW---ALAALDVIRDESGQIIGLAKVTRDI---TDRRETAQQLDAVRAQ--LF 146
           R  DGT  W    + A   +    G+ +   K  RD      R+  AQ  +  RA+  L 
Sbjct: 468 RDSDGTYHWIAWTIVAHGALFYMVGRDVTEEKQARDALAEAHRQLIAQTAERERAEEALR 527

Query: 147 QAQKLEALGQLTGGLAHDFNNMLTIIISSARLAL------ATQDPARTQRMLQHILDASQ 200
           QAQK+E +GQLTGG+AHDFNN+LTII+ +    +      +  DPAR + +++     ++
Sbjct: 528 QAQKMEVIGQLTGGVAHDFNNLLTIILGNLETLIRHIDGASPPDPARVRTLVERATLGAE 587

Query: 201 RGTELTQQLLSFARHRKFDVASVAPAELVNATRGLLEHALPSSIDLKVLLQPDLPLIEV- 259
           R   LTQ+LL+F+R +  D     P +L   T GL++  L  +I  K+ L   L ++ V 
Sbjct: 588 RAAALTQRLLAFSRRQPLDPR---PLDLNRLTLGLID-LLHRTIGEKIALDTRLSMVPVG 643

Query: 260 ---DAGQLQMVLLNLLFNARDAIDGHGRISL--TVDVV---------ELFGEVEGLK-GS 304
              DA QL+ V+LNL  NARDA+   GR+ L  T D+V            G   G   G+
Sbjct: 644 VLADANQLESVVLNLALNARDAMPTGGRLILETTADLVIEAPTAEKRPAKGNPAGAPPGT 703

Query: 305 FVRFEVEDSGEGIPTEILPRIFEPFFTTKPFGKGTGLGLSQVYGFARQSGGAICVDSEPG 364
           +    V D+G+G+   +L R+F+PFFTTK  G+GTGLGLSQ YGF +QSGG I ++SEPG
Sbjct: 704 YAALRVTDTGKGMEAGVLARVFDPFFTTKDVGQGTGLGLSQAYGFIKQSGGHIGIESEPG 763

Query: 365 RGTCMRLYLPMYQNQTDSP 383
           +GT + + LP  +     P
Sbjct: 764 QGTTVTILLPRLEGALPLP 782