Pairwise Alignments

Query, 481 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 481 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  129 bits (325), Expect = 2e-34
 Identities = 134/480 (27%), Positives = 207/480 (43%), Gaps = 50/480 (10%)

Query: 10  TGIDGLDALLKGGLIAGASYIIQGPPGAGKTILANQLACGHVRGGGRVLVATLLSESHER 69
           +GI GLD +L+GGL A   YI+QG PG+GKT  A Q     V  G   +  +L     E 
Sbjct: 14  SGISGLDEILRGGLPASNLYIVQGAPGSGKTTAALQFLRAGVALGEPCIYVSLSQTRAEL 73

Query: 70  LFQYLS---TLDFFDPALVGDKIQFVSAFDTLEQDG-----------LDAVVRLLRQEIA 115
               LS   TLD       G +++ +SA D++ +             LD   + +   I 
Sbjct: 74  EAIALSHGWTLD-------GIRVEELSASDSINRAADQTIFQTTELRLDETRKAIESAIE 126

Query: 116 RQQASLLIVDGVLNARVRAETALDTKKFVSELQGHAAF---AGCTVLLL---TSARLDEG 169
             + S L+ D +L  R+      D+ +F  EL    AF        LLL   TS     G
Sbjct: 127 EHKPSRLVYDSLLEIRL---ITADSPRFRRELIAFKAFLAQRNIVALLLDTQTSETDRTG 183

Query: 170 SPEHTMVDGVIELGEQLVGSRAV-RHVQLRKTRGSGALSGRHECLIDE-SGMQVYPRLEA 227
                +  GVI L + L     V R +++ K RG     G H+  I E  G+ V+PR+  
Sbjct: 184 EEVDGIAHGVIRLDKSLEEYGGVRRRIEVSKMRGVPVADGYHDMAIREGEGVVVFPRIV- 242

Query: 228 LFSHPSQLGSGTLAR------ISSGVPTFDEMLGGGLATGSVSLLMGPSGIGKTSLGLAF 281
                     G  AR      I SGV T DEM GGG  +G+ +L++G +G GK+++   +
Sbjct: 243 ---------PGAAARTVKPQLIKSGVDTLDEMFGGGQESGTTTLVIGQAGTGKSTMASLY 293

Query: 282 LGASTPQAPGLH-FGFYETPERLRSKAASLGYDFAAMEKGGSLQLCWQPTTEGLLDQVGA 340
             A+  +   +  F F E  E    ++  LG       + G L L      E    + G 
Sbjct: 294 ATAALKRGESVGLFLFEERIETFFRRSEGLGMALRQFHEDGQLILRDFNPNEISPGEFGQ 353

Query: 341 RLLERVAAQGSKRVVIDSLGAFSRLAIDPTRLNAFFRALAGELRARDVSVMLTWEMRDIF 400
            + + V ++  K VVIDS   +        +     ++L   L    V  +L      + 
Sbjct: 354 IVQQSVNSEKVKVVVIDSFTGYLNSLPHREKAVRDIQSLLKYLARAGVLTILIVAQHGLL 413

Query: 401 GAEISAPAPDLSSIVDNLMLMRFVELDSQLRRMLSVLKVRDSHHDPALHELLIVPQGITL 460
           G  +     D+S + D ++L+R  E + +LRR ++V+K R   HD  + EL I   G+++
Sbjct: 414 GQGVGIDV-DVSFLGDTVLLLRIAEHEGRLRRSITVVKKRHGPHDLDVRELFIQSSGVSV 472



 Score = 55.5 bits (132), Expect = 4e-12
 Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 22/225 (9%)

Query: 243 ISSGVPTFDEMLGGGLATGSVSLLMGPSGIGKTSLGLAFLGASTPQA-PGLHFGFYETPE 301
           +SSG+   DE+L GGL   ++ ++ G  G GKT+  L FL A      P ++    +T  
Sbjct: 12  VSSGISGLDEILRGGLPASNLYIVQGAPGSGKTTAALQFLRAGVALGEPCIYVSLSQTRA 71

Query: 302 RLRSKAASLGYDFAAME----------KGGSLQLCWQPTTEGLLDQVGARLLERVAAQGS 351
            L + A S G+    +              + Q  +Q TTE  LD+    +   +     
Sbjct: 72  ELEAIALSHGWTLDGIRVEELSASDSINRAADQTIFQ-TTELRLDETRKAIESAIEEHKP 130

Query: 352 KRVVIDSLGAFSRLAIDPTRLNAFFRALAGELRARDVSVMLTWEMRDIFGAEISAPAPDL 411
            R+V DSL     +  D  R      A    L  R++  +L     D   +E      ++
Sbjct: 131 SRLVYDSLLEIRLITADSPRFRRELIAFKAFLAQRNIVALLL----DTQTSETDRTGEEV 186

Query: 412 SSIVDNLM-LMRFVELDSQLRRMLSVLKVR-----DSHHDPALHE 450
             I   ++ L + +E    +RR + V K+R     D +HD A+ E
Sbjct: 187 DGIAHGVIRLDKSLEEYGGVRRRIEVSKMRGVPVADGYHDMAIRE 231