Pairwise Alignments

Query, 305 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 417 a.a., ABC-type spermidine/putrescine transport system, permease component I from Pseudomonas stutzeri RCH2

 Score =  189 bits (481), Expect = 7e-53
 Identities = 87/213 (40%), Positives = 140/213 (65%)

Query: 80  SAYARVLFNTFSVAGVVTLISVLLGFPLAWAITLVPKGWGRWLLNIVLLSMWTSLLARTY 139
           + Y  +   TF +  V+T+I +LL +PLA+ +  +P      L+ +VLL  WTS+L R  
Sbjct: 193 AVYLDIFARTFWMGLVITVICLLLAYPLAYLLANLPARQSNLLMILVLLPFWTSILVRVA 252

Query: 140 SWLVLLQSSGVINKALMAMGIIDAPLEMVHNLTGVVIGMSYIMIPFIVLPLQATMHAIDP 199
           +W+VLLQS G+IN AL+ MG+ID PL++V N TGV I M +I++PF++LP+ + M  I P
Sbjct: 253 AWIVLLQSGGLINGALLKMGLIDEPLQLVFNRTGVYIAMVHILLPFMILPIYSVMKNISP 312

Query: 200 MVLQAGSICGASPWTNFWKVFLPLCRSGLFSGALMVFVMSLGYYVTPALLGGAQNMMLPE 259
             ++A    G  P+ +FW+V+ P   +G+ +G L+VF++S+GYY+TPALLG   + M+  
Sbjct: 313 SYMRAAVSLGCHPFASFWRVYFPQTLAGVGAGCLLVFIISIGYYITPALLGSPNDQMVSY 372

Query: 260 FIIQQVQSFLNWGLASAAAALLVAITLVLFYLY 292
           F+     + +NWG+A+A   LL+  T++L+ +Y
Sbjct: 373 FVAFYTNTTINWGMATALGGLLLLATMLLYVIY 405



 Score = 28.5 bits (62), Expect = 3e-04
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 27 RASLSQRWKGSRNLLPALLFLGVFFFAPLVGLLLRGVLEP 66
          RA    + K    +LP LLF+ + F  P+  LL R V  P
Sbjct: 23 RAERVNKLKSQALILPLLLFVLLTFLVPIASLLWRSVENP 62