Pairwise Alignments

Query, 305 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  159 bits (403), Expect = 6e-44
 Identities = 80/255 (31%), Positives = 148/255 (58%), Gaps = 5/255 (1%)

Query: 40  LLPALLFLGVFFFAPLVGLLLRGVLEPTPGLGNYEQLFANSAYARVLFNTFSVAGVVTLI 99
           L+P L+ +G  F       L++          NY +L  +  Y +V+ ++F +A V TLI
Sbjct: 25  LIPNLMIIGTSFLTRDEANLIKFAFT----FENYTRLL-DPLYGKVMLHSFYMAIVATLI 79

Query: 100 SVLLGFPLAWAITLVPKGWGRWLLNIVLLSMWTSLLARTYSWLVLLQSSGVINKALMAMG 159
            +++G+P A+ +  +P+ W  ++L ++++  WT+ L RTY   ++L + G++N+ALM++G
Sbjct: 80  CLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQGILNQALMSLG 139

Query: 160 IIDAPLEMVHNLTGVVIGMSYIMIPFIVLPLQATMHAIDPMVLQAGSICGASPWTNFWKV 219
           +IDAPL ++   T V+IG+ YI++PF++LPL + +  +D   ++A    GA+ +    +V
Sbjct: 140 LIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEAARDLGANKFQTLVRV 199

Query: 220 FLPLCRSGLFSGALMVFVMSLGYYVTPALLGGAQNMMLPEFIIQQVQSFLNWGLASAAAA 279
            LPL   G+  G L+V + +LG +    LLGGA+N+++   I  QV +  +W   +A + 
Sbjct: 200 ILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQVLNARDWPFGAATSI 259

Query: 280 LLVAITLVLFYLYLK 294
            L     ++ Y Y +
Sbjct: 260 ALTLAMAIMLYAYYR 274