Pairwise Alignments

Query, 341 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

Subject, 350 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  197 bits (502), Expect = 3e-55
 Identities = 126/344 (36%), Positives = 191/344 (55%), Gaps = 19/344 (5%)

Query: 9   AVLSASLLTLACQAALAADSLNFVSWGGTTQDAQKEAWAVPFTKATNIKVVQDGPTD--Y 66
           AVLSASL      A   A  L  VSWGG  QDAQ++ +  PF + +  K V D   D   
Sbjct: 15  AVLSASLA-----APAFARDLTVVSWGGNYQDAQRDIYFKPFAEKSG-KPVLDETWDGGI 68

Query: 67  GKLKAMVESGNVQWDVVDVEADFALRAASEGLLEPLDFNQIK-RDKIDPRFVSDHGVGSF 125
           G +++ V++G   WD V VEA+      ++GL E +D++++  + K     V+D GVG+ 
Sbjct: 69  GVIQSKVKAGAPNWDAVQVEAEELALGCADGLYETIDWDKMGGKGKFLESAVNDCGVGAI 128

Query: 126 FFSFVLGYNEGKLGANKPVDWTALFDTKAYPGKRALYKWPSPGVLELALLADGVAPDKLY 185
            +S  + Y+  KL    PV W   ++ + +PGKR+L K P    LE ALLADGV+ D+LY
Sbjct: 129 VWSTAIAYDGDKLKEG-PVSWADFWNVEKFPGKRSLRKGPKY-TLEFALLADGVSKDELY 186

Query: 186 PL-----DLDRAFKKLDTIKQDIVWWGGGAQSQQLLASGEASLGQFWNGRVYALQQ-DGA 239
            +      ++RAFKKL  +K  IVWW  GAQ  Q LASGE ++   +NGR+  + + +G 
Sbjct: 187 DVLGTDEGVERAFKKLGELKPHIVWWESGAQPLQFLASGEVAMTSAYNGRITGINRTEGK 246

Query: 240 PVGVSWKQNLVMADFLVIPKGAKNKEAAMKFLANASSAEGQAEFANKTAYAPVNVDSVAK 299
              V W  ++   D  V+ K A+NK+AA  F+A AS  E QA+     AY   N ++ A+
Sbjct: 247 NFKVVWPGSIYAVDSWVVLKDAENKDAAQDFIAFASLPEHQAKLPEFVAYGLPNKEAAAR 306

Query: 300 LDKDLAPNLPT--AYAQDQVTLDFAYWAKNGQAIAARWNEWLVK 341
           +  + A +LPT     ++ ++L+  +W  N + +  R+N WL +
Sbjct: 307 VPPEFAKDLPTDPVNMKEAISLNVDFWIDNAETLTQRFNAWLAQ 350