Pairwise Alignments

Query, 406 a.a., putative Efflux transporter from Pseudomonas putida KT2440

Subject, 434 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  127 bits (319), Expect = 6e-34
 Identities = 100/389 (25%), Positives = 184/389 (47%), Gaps = 10/389 (2%)

Query: 5   SILSWSRP---HSPLHSLLLGSLLHDASKGIASPLMVLLLTTRFGLNSWQTGALLGISML 61
           S+  W R    + P+ ++L+G+L    S  +A P +V+ L   +   + + GA+L  S L
Sbjct: 23  SLFQWERVGRFNFPVWTVLIGTLFARTSFFMAWPFLVVFLYQDYHATATEVGAMLATSAL 82

Query: 62  LATLMSLPAGLLFDRFARLHLATITLLLMTLAVGLLPFAQIILLVSLLLVFMEFAAALFG 121
           + +L  L +G L D+F R  +     L+ T A   +  +  I    +++V       +  
Sbjct: 83  VGSLTGLYSGYLSDKFGRKWVMVSGTLIATFAYTGIGLSNQIWQFFIMIVLTGLMRPMIE 142

Query: 122 IGLKALLADFV-SVKQRVSAFSYRYILTNVAFAIGPVLGVRLAEVSLTLALLVAAGACGA 180
              KA++ D +   K R  A + RY L N+  AIGP++G+ LA     +  +V   A   
Sbjct: 143 APGKAVIGDNLPDEKDRELALNVRYFLLNLGGAIGPLIGITLALAHPQVLFIVTGIAYFL 202

Query: 181 AMVVMMCLGASQGQPRTSLKTGAPSLADALKVLGNDRNLVLYTLGSFFNTVVHGRFTFFL 240
             + ++     +G+ +   ++  P+ +  L+V+  D   V   L +F    V+G+    L
Sbjct: 203 FGLWLLATLERKGRFQQPDRSLLPNFSATLRVISKDNVFVKMMLANFLMMFVYGQVESSL 262

Query: 241 SLWLLYQYPANQGMEMLSWLLLTNAITVIALQRLVSRYITLETLNSRVMMGALLFSIGLL 300
              ++    A+   ++++ L+L N +T+I  Q    + +    L +R  +G  L  +  +
Sbjct: 263 PQVIVRSGIADAA-QLVAGLVLVNTMTIILFQFPTLKLLESVPLFTRTRLGMALMGLAQV 321

Query: 301 GFSVSEQL--TAWCLSMLVFTLGELLIQPAEYLYIDSISPPPLKGSYFAAHNLASLGAAV 358
           GF  + +     W L+  V ++GE++  P   + ID ++P  L+GSYF A  L SLG A+
Sbjct: 322 GFMFTPEAFPLGWYLACFVLSMGEVIAFPTLNVQIDRLAPAHLRGSYFGAAALYSLGFAI 381

Query: 359 SPAWCGFILSLAGPQ---GLCFSLIACVL 384
           +P   G ++     Q   GLCF L   ++
Sbjct: 382 APLAGGMMIEYLNAQWLYGLCFVLCLAMM 410