Pairwise Alignments

Query, 310 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 305 a.a., Regulatory protein, LysR:LysR, substrate-binding from Pseudomonas fluorescens FW300-N2E2

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 75/300 (25%), Positives = 123/300 (41%), Gaps = 21/300 (7%)

Query: 1   MQLKFRHIEIFKAIMITGTVTGAAQLLETSQPTISRELSNFESSIGMMLFERHKGRLKPT 60
           M+L    + +F +++  GT+  AA+    +   +S+ LS  E  +   L  R    + PT
Sbjct: 12  MKLDPVSLRLFVSVIEEGTIAAAAKREHIAAAAVSKRLSELEELLDSKLLNRTNKGITPT 71

Query: 61  AQGMALHSEILKAYDGLARVSAAAKIIKLGLREKVSVLSLPVLSQTILPASLARFMEIYP 120
             G++L      A + L  +    +    G R  V VL+        LP+ +  FME+YP
Sbjct: 72  DAGLSLLFMARSALNNLNEIVVQMRDYSHGRRGSVHVLANISAITQFLPSLIKSFMELYP 131

Query: 121 DINLSLSTHDSPDIEPLISSQAYDIGLIEGVSAPMGTTTEHLTDVDE--------VCVLP 172
            IN+SL    S  I   +S    DIG+         T   H  D++         V ++P
Sbjct: 132 LINISLEERPSLAITKAVSENRTDIGIF--------TRLPHGADIEVFPFRTDRLVLLVP 183

Query: 173 PGHPLSAFTHIDPRQLSQYPFIHLAPNDPYRHQLDSVFAQLGVSRSSIIEVDNAATICQM 232
            GHPL+    +   +   + +I L        QL      LG S    +EV +   +C  
Sbjct: 184 LGHPLATRHSVKFSETLDHEYIALRSGTHLNFQLIKAANDLGRSLRIRMEVSSYDALCLT 243

Query: 233 VLSGIGVSIINPLVANTYASQGLTIRRL-----TVSVPFSISLVRPLQRGASLVVDHLVE 287
           V +G+G+ I+    A  Y   G  + RL     +  +   +     L   A L ++HL+E
Sbjct: 244 VQAGLGIGIMPEGSAAIYKMDGAKVIRLDEPWASRELSVCVRSRAALSVAAGLFLEHLLE 303