Pairwise Alignments

Query, 304 a.a., putative permease (RarD protein) from Pseudomonas putida KT2440

Subject, 296 a.a., rarD protein from Pseudomonas stutzeri RCH2

 Score =  119 bits (298), Expect = 9e-32
 Identities = 84/285 (29%), Positives = 150/285 (52%), Gaps = 3/285 (1%)

Query: 5   TFDAAAGLSAALASNCLLGLSSLYWKALAALPALALLGCRVLMSLLCVTLLLAARKELVP 64
           T +   G    LA+  + G+  LY+KAL    AL ++  RV+ S +  +L+L   +    
Sbjct: 3   TANLRKGYLLGLATFSIWGMFPLYFKALEQYGALEIVTQRVIWSAVFGSLVLLVWRHPGW 62

Query: 65  LLCVLKR-RDIALHGAAAVLVAGNWGTFIWASIHGHVLESGLGYLIAPVLGISLGLLLYQ 123
              +L   R + + G ++VL+A NW  ++WA  H  ++E+ LGY I P++ + LG+L+ +
Sbjct: 63  WRELLAHPRRLGVLGISSVLIAANWLIYVWAVNHDRMVEASLGYYINPLVNVLLGMLVLR 122

Query: 124 ERLSVPRGLSLTMVIGSVVYLLFEKGGLDSRVFLVIGVTWGTYTWLKKLARLPPWSGLFL 183
           ERL   + L++ M    V   L   G     + +V+ +++G+Y  L+KLA +    GL +
Sbjct: 123 ERLRPLQWLAVAMATVGVSLQLLMLGEF-PWISIVLALSFGSYGLLRKLAPVAALPGLVV 181

Query: 184 ESLVLGVLLMPLILWVSTPVAGIAALGSADTAL-LLLCGAVSLLPLALFSFAARRLPLSV 242
           E+ +L  + +  + W S+  +   A  ++  AL L+  G V+L+PL  F+ AAR LP S 
Sbjct: 182 ETWMLLPVALVWLFWFSSGTSTEPAFWTSSDALWLMAAGPVTLIPLLGFNAAARHLPYST 241

Query: 243 MGLMQFVLPLTQFFVALMFYGQIPSHGAMLAFALIALAMLLVILE 287
           +G +Q++ P     +A+  +G+       LAF  I   + +  L+
Sbjct: 242 LGFLQYLTPTLLLILAVQLFGEPFPVDRQLAFFCIWAGLAVYSLD 286