Pairwise Alignments

Query, 1155 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 914 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  180 bits (456), Expect = 5e-49
 Identities = 110/259 (42%), Positives = 156/259 (60%), Gaps = 9/259 (3%)

Query: 477 ADDLQRSSKYKSEFLANMSHELRTPLNSSLILAKLLAENAEGNLSEEQVKFAESIYSAGN 536
           A+     ++ KS FLA MSHE+RTPLN  L + +LL E     L   Q  + ++I S+GN
Sbjct: 399 AERAASENEAKSRFLAKMSHEIRTPLNGVLGMLQLLRETP---LDRSQQFYLDTISSSGN 455

Query: 537 DLLNLINDILDIAKVEAGKLEVRPETTQVERLVEGLRGMFQPLAGHKGLAFEVKVEPQVP 596
            L+ +INDILD A++ +GKL +      +E L+     +F   +  K L+  V +EP VP
Sbjct: 456 SLMAVINDILDYARIGSGKLSLEDIDFDLEILISETIRLFTAQSLEKQLSLHVGLEPGVP 515

Query: 597 VTLFTDRQRLEQILKNLLSNAIKFTERGQVSMNVSFQ--ADSG--IVFAVRDTGIGIAAD 652
             +  D  RL+QIL NLLSNA+KFTE G V + VS +   D G  +VF V D+GIG+  +
Sbjct: 516 RRIRGDPTRLKQILMNLLSNALKFTEHGHVLLEVSCRQTPDGGPRLVFCVSDSGIGMRQE 575

Query: 653 QQQAIFGAFHQVDGTSNRRYGGTGLGLSISRDLAHLLGGQINVDSSPGQGSVFSLILPER 712
               +F +F Q D ++ RRYGG+GLGL+IS++L  ++ G I V S+PG+GS F   +P R
Sbjct: 576 VLAQLFESFSQGDSSTTRRYGGSGLGLAISKELVEMMNGHIEVQSAPGRGSRFCFEIPLR 635

Query: 713 YAAEAEDVEPQSL--RPAV 729
            A + ED   Q L  RPA+
Sbjct: 636 TATDVEDPLTQLLAGRPAL 654



 Score = 81.3 bits (199), Expect = 3e-19
 Identities = 41/121 (33%), Positives = 78/121 (64%), Gaps = 4/121 (3%)

Query: 1033 VLLVDDDVRNIFALTSALEHKGAIVEIGRNGREAIERLEQHDD-IDLVLMDVMMPEMDGF 1091
            +L+ +D+  N   +   L+ +G  V++  NGR+A++   +  D + L+LMD  MPE+DGF
Sbjct: 789  ILVAEDNPVNQMVVRGLLKKRGYAVQLADNGRQAVDLYRRDPDAVQLILMDCEMPELDGF 848

Query: 1092 EATRLIRQ---QPRWRKLPIIAVTAKAMKDDQQRCLQAGANDYLAKPIDLDRLFSLIRVW 1148
            EA+R IR+     + + +PIIAVTA  + + +QR L++G ++++ KP++  +L++ +  +
Sbjct: 849  EASRQIRKLEADQQLQAVPIIAVTAHVLAEHRQRGLESGMDEFIGKPLESRQLYACLDSY 908

Query: 1149 L 1149
            L
Sbjct: 909  L 909



 Score = 37.7 bits (86), Expect = 4e-06
 Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 23/179 (12%)

Query: 721 EPQSLRPAVDALP---PAPQAPLAAAVT-----RPAPAFADDRER-APFDTR-CILVIED 770
           EP  L P +  +    P   APL  A+       PA +   D+   AP  +  CILV ED
Sbjct: 735 EPPPLTPDLRLISLALPLQSAPLREALQALYEREPAQSAETDKASIAPLQSEPCILVAED 794

Query: 771 EPNFARILFDLAHELGYSCLVAHGADEGFELAAQYIPDA---ILLDMRLPDHSGLTVLQR 827
            P    ++  L  + GY+  +A    +  +L  +  PDA   IL+D  +P+  G    ++
Sbjct: 795 NPVNQMVVRGLLKKRGYAVQLADNGRQAVDLYRR-DPDAVQLILMDCEMPELDGFEASRQ 853

Query: 828 LKE-QASTRHIPVHIISVEDRV-----EAAMHMGAVGYAVKPTSREELKEVFARLEAKL 880
           +++ +A  +   V II+V   V     +  +  G   +  KP    E ++++A L++ L
Sbjct: 854 IRKLEADQQLQAVPIIAVTAHVLAEHRQRGLESGMDEFIGKPL---ESRQLYACLDSYL 909