Pairwise Alignments

Query, 1155 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

 Score =  206 bits (524), Expect = 7e-57
 Identities = 158/489 (32%), Positives = 235/489 (48%), Gaps = 54/489 (11%)

Query: 402 ETQQLNEELQVQQEELKTANEELEEQSRVLKESQAHLETQQAELEQTNEQLSERTEALDR 461
           E  Q+ + +   ++  K      E +    +E Q H E  +  +EQ   QLSE    L++
Sbjct: 392 ELGQMGQAIAHARDTAKALKVVAESEVLAKRELQQHKEHLEELVEQRTCQLSEMNHKLNQ 451

Query: 462 KNDELSQAQLELQARADDLQRSSKYKSEFLANMSHELRTPLNSSLILAKLLAENAEGNLS 521
             + L+ A+   QA     +++S+ KS FLA MSHE+RTP+N  L  A+LL +     L+
Sbjct: 452 --EVLNHAKARQQA-----EQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTT---LT 501

Query: 522 EEQVKFAESIYSAGNDLLNLINDILDIAKVEAGKLEVRPETTQVERLVEGLRGMFQPLAG 581
             Q  + + I  +G  LL ++ND+LD +K+EAG LE+      + RLV     + Q  A 
Sbjct: 502 STQQHYVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAR 561

Query: 582 HKGLAFEVKVEPQVPVTLFTDRQRLEQILKNLLSNAIKFTERGQVSMNVSFQAD-SGIVF 640
            KG+     ++  V      D  R+ Q+L NL+ N IKFT++G+V + +    D  GI F
Sbjct: 562 EKGITLTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQGIRF 621

Query: 641 AVRDTGIGIAADQQQAIFGAFHQVDGTSNRRYGGTGLGLSISRDLAHLLGGQINVDSSPG 700
           AV D+GIGIA ++Q  +F AF Q D    R+ GGTGLGL+ISR L   +GG++ + S  G
Sbjct: 622 AVEDSGIGIAEEEQATLFDAFTQAD-AGRRKLGGTGLGLAISRKLVQAMGGELQLASQLG 680

Query: 701 QGSVFSLILPERYAAEAEDVEPQSLRPAVDALPPAPQAPLAAAVTRPAPAFADDRERAPF 760
           QGS F   LP       E VE  +L  AVD +P A                         
Sbjct: 681 QGSCFWFTLP---LPVGEPVETPAL--AVDDVPVAN------------------------ 711

Query: 761 DTRCILVIEDEPNFARILFDLAHELGYSCLVAHGADEGFELAAQYIPDAILLDMRLPDHS 820
               +L++ED      +       LG+   +A    E      Q   D  LLD+ LPD +
Sbjct: 712 ----VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGN 767

Query: 821 GLTVLQRLKEQASTRH---IPVHIISV---EDRVEAAMHMGAVGYAVKPTSREELKEVFA 874
           G+ +L+ L++   + H   IP   +S     + V   +  G  GY  KP  +E+L    A
Sbjct: 768 GVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLA---A 824

Query: 875 RLEAKLTQK 883
            L  +LT K
Sbjct: 825 MLRQQLTAK 833



 Score = 49.3 bits (116), Expect = 2e-09
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 4/117 (3%)

Query: 1033 VLLVDDDVRNIFALTSALEHKGAIVEIGRNGREAIERLEQHDDIDLVLMDVMMPEMDGFE 1092
            VLLV+D+  N       L   G  V + ++ +EA +   Q    D+ L+D+ +P+ +G +
Sbjct: 712  VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEA-KLCFQQQRFDIALLDIHLPDGNGVD 770

Query: 1093 ATRLIRQQP---RWRKLPIIAVTAKAMKDDQQRCLQAGANDYLAKPIDLDRLFSLIR 1146
              R +RQ         +P IAV+A    ++    L AG + YL KP+  ++L +++R
Sbjct: 771  LLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLR 827



 Score = 32.3 bits (72), Expect = 2e-04
 Identities = 17/63 (26%), Positives = 33/63 (52%)

Query: 886 HILLVEDDDLQRESIARLIGDDDVEITAVAMAQDALALLRQNIYDCMIIDLKLPDMLGNE 945
           ++LLVED+++        +     ++T     Q+A    +Q  +D  ++D+ LPD  G +
Sbjct: 711 NVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVD 770

Query: 946 LLK 948
           LL+
Sbjct: 771 LLR 773



 Score = 28.1 bits (61), Expect = 0.004
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 24/144 (16%)

Query: 372 DEELLERVGGNLGMSIES-ARYRQRLQEVLAETQQLNEELQVQQEELKTANEELEEQSR- 429
           D  LL+R+  ++   I++ A+  +R++  L     L  +L    +E++   +ELE+ +R 
Sbjct: 108 DSVLLDRLEQDVQNVIDTLAQLGRRVEHRLT----LESQLSTSVKEMRKLAQELEQLTRT 163

Query: 430 -VLKESQAHL-----------ETQQAELEQTNEQLSERTEALDRKNDELSQA------QL 471
            VL  S   +           + QQA++ Q  + L E    L  +  EL         ++
Sbjct: 164 QVLNTSTIAIANVTHIYDLLQKQQQAQVYQALDNLVEVDLDLAERLHELHLLAFKVLNEI 223

Query: 472 ELQARADDLQRSSKYKSEFLANMS 495
           E      DL+R     SEF AN+S
Sbjct: 224 EETQTVTDLERILALDSEFAANLS 247