Pairwise Alignments
Query, 1155 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440
Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056
Score = 207 bits (528), Expect = 3e-57
Identities = 167/605 (27%), Positives = 279/605 (46%), Gaps = 78/605 (12%)
Query: 400 LAETQQLNEELQVQQEELKTANEELEEQSRVLKESQAHLETQQAELEQTNEQLSERTEAL 459
+AE ++ QQ+ + L + + V +E + + ++ N + +
Sbjct: 525 VAERFAAAHQVLTQQQSSQNYEVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMT 584
Query: 460 DRKN--DELSQAQLELQARADDLQRSSKYKSEFLANMSHELRTPLNSSLILAKLLAENAE 517
+RK DEL +A+ A S+ K +FLANMSHE+RTP+N+ L +A L
Sbjct: 585 ERKEMEDELRKAKEAADAM-------SQAKGDFLANMSHEIRTPMNAILGMAHLALNTP- 636
Query: 518 GNLSEEQVKFAESIYSAGNDLLNLINDILDIAKVEAGKLEVRPETTQVERLVEGLRGMFQ 577
L Q K+ I + +LL +INDILD +K+EAGKL V ++ +++ + +
Sbjct: 637 --LDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVS 694
Query: 578 PLAGHKGLAFEVKVEPQVPVTLFTDRQRLEQILKNLLSNAIKFTERGQV--SMNVSFQAD 635
A KG+ F + ++P +P+ L D RL Q++ NL NA+KFT +G++ S VS +
Sbjct: 695 LKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNE 754
Query: 636 SGIV--FAVRDTGIGIAADQQQAIFGAFHQVDGTSNRRYGGTGLGLSISRDLAHLLGGQI 693
+ FAV+DTGIGIA D+ +F AF Q D + R+YGGTGLGLSIS+ L L+GGQI
Sbjct: 755 QQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQI 814
Query: 694 NVDSSPGQGSVFSLILPERYAAEAEDVEPQSLRPAVDALPPAPQAPLAAAVTRPAPAFAD 753
V S G+GS F + +D + + +++P AD
Sbjct: 815 TVHSEEGKGSTFEFSV----VCGLQDAKMRD-------------------ISQPVHGLAD 851
Query: 754 DRERAPFDTRCILVIEDEPNFARILFDLAHELGYSCLVAHGADEGFELAAQYIPDAILLD 813
R +LV++D + IL L + ++ + E Q D + +D
Sbjct: 852 KR---------VLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVD 902
Query: 814 MRLPDHSGLTVLQRLKEQASTRHIPVHIISV---EDRVEAAMHMGAVGYAVKPTSREELK 870
+P +G+ +L R+K H+ +++ E ++ VKP + L
Sbjct: 903 WNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNPSNLL 962
Query: 871 EVF---------------ARLEAKLTQKLKHILLVEDDDLQRESIARLIGDDDVEITAVA 915
+ A ++ + +LLVED+++ +E L+ D + +
Sbjct: 963 DAIVTSYGIEHVRHKTNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVAN 1022
Query: 916 MAQDALALLRQNIYDCMIIDLKLPDMLGNELLKRMTA-EDIRAFP-----PVIVYTGRNL 969
Q+AL L +D +++D+++P M G +TA E IRA P P++ T +
Sbjct: 1023 HGQEALERLEHADFDLVLMDMQMPVMDG------ITATEHIRANPRWHSLPIVAMTANAM 1076
Query: 970 TREEE 974
+ E
Sbjct: 1077 AIDIE 1081
Score = 152 bits (383), Expect = 2e-40
Identities = 91/265 (34%), Positives = 144/265 (54%), Gaps = 7/265 (2%)
Query: 885 KHILLVEDDDLQRESIARLIGDDDVEITAVAMAQDALALLRQNIYDCMIIDLKLPDMLGN 944
K +L+V+D+D R + L+ + V+ +AL+ ++Q +D + +D +P M G
Sbjct: 852 KRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGI 911
Query: 945 ELLKRMTAEDIRAFPPVIVYTGRNLTREEEADLLKYSRSIIIKGARSPERLLDEVTLFLH 1004
ELL R+ +R + T + + K ++I+K +P LLD +
Sbjct: 912 ELLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPV-NPSNLLDAIV---- 966
Query: 1005 KVESQLSNERQRMLKTARSRDKVFEGRKVLLVDDDVRNIFALTSALEHKGAIVEIGRNGR 1064
+ + R + + + F G+ +LLV+D+ N L+ G V + +G+
Sbjct: 967 -TSYGIEHVRHKTNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQ 1025
Query: 1065 EAIERLEQHDDIDLVLMDVMMPEMDGFEATRLIRQQPRWRKLPIIAVTAKAMKDDQQRCL 1124
EA+ERLE H D DLVLMD+ MP MDG AT IR PRW LPI+A+TA AM D +RCL
Sbjct: 1026 EALERLE-HADFDLVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCL 1084
Query: 1125 QAGANDYLAKPIDLDRLFSLIRVWL 1149
QAG ND+L+KPI++D+ + ++R +L
Sbjct: 1085 QAGMNDHLSKPIEVDKFYQVLRHFL 1109
Score = 43.9 bits (102), Expect = 9e-08
Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 21/185 (11%)
Query: 719 DVEPQSLRPAVDALPPAPQAPLAAAVT-------RPAPAFADDRERAPFDTRCILVIEDE 771
D E L A+ P P L A VT R A R F + +L++ED
Sbjct: 941 DGENSKLVDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQSLLLVEDN 1000
Query: 772 PNFARILFDLAHELGYSCLVAHGADEGFELAAQYIPDAILLDMRLPDHSGLTVLQRLKEQ 831
+ L + G + +VA+ E E D +L+DM++P G+T + ++
Sbjct: 1001 EVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIRAN 1060
Query: 832 ASTRHIPVHIISVEDR---VEAAMHMGAVGYAVKPTSREELKEVFARLEAKLTQKLKHIL 888
+P+ ++ +E + G + KP + K Q L+H L
Sbjct: 1061 PRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVD-----------KFYQVLRHFL 1109
Query: 889 LVEDD 893
V D+
Sbjct: 1110 QVSDE 1114