Pairwise Alignments
Query, 1155 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440
Subject, 917 a.a., sensory histidine kinase from Sinorhizobium meliloti 1021
Score = 264 bits (674), Expect = 3e-74
Identities = 178/536 (33%), Positives = 276/536 (51%), Gaps = 41/536 (7%)
Query: 465 ELSQAQLELQARADDLQRSSKYKSEFLANMSHELRTPLNSSLILAKLLAENAEGNLSEEQ 524
+L Q Q+EL+ + +++ KS FLA+MSHELRTPLN+ + +++L E A + EE
Sbjct: 399 QLKQRQVELERAKSHAESANEAKSRFLASMSHELRTPLNAIIGYSEMLIEEARDHEDEEL 458
Query: 525 VKFAESIYSAGNDLLNLINDILDIAKVEAGKLEVRPETTQVERLVEGLRGMFQPLAGHKG 584
V + I SAG LL+LINDILD++K+EA K+EV ET V L+ + PL G
Sbjct: 459 VPDLDKIASAGRHLLSLINDILDLSKIEANKMEVFLETFSVADLLRDVAATVAPLMARNG 518
Query: 585 LAFEVKVEPQVPVTLFTDRQRLEQILKNLLSNAIKFTERGQVSMNVSFQA---DSGIVFA 641
F E + + +D+ +L Q L NLLSNA KFT G+V++ V + +VF
Sbjct: 519 NEFTQDFEADLG-EMHSDQTKLRQNLFNLLSNAAKFTNGGRVTLRVRREQRPDRDWLVFQ 577
Query: 642 VRDTGIGIAADQQQAIFGAFHQVDGTSNRRYGGTGLGLSISRDLAHLLGGQINVDSSPGQ 701
V DTGIG++ +QQ+ +F AF Q D ++ R YGGTGLGLSI+R ++GG + V+S G+
Sbjct: 578 VTDTGIGMSPEQQERLFNAFTQADASTTRNYGGTGLGLSITRSFCRMIGGVVTVESEVGK 637
Query: 702 GSVFSLILPERYAAEAEDVEPQSLRPAVDALPPAPQAPLAAAVTRPAPAFADDRERAPFD 761
GSVF++ +P + EA+ PA P PQ
Sbjct: 638 GSVFTMEVPAQCEREADG------SPA----EPVPQVG---------------------S 666
Query: 762 TRCILVIEDEPNFARILFDLAHELGYSCLVAHGADEGFELAAQYIPDAILLDMRLPDHSG 821
R L+I+DEP ++ E G + + A EG A ++ PDAI+LD+ +P G
Sbjct: 667 GRTALIIDDEPAARSLIAKALAEAGLASIEASNGQEGLAAARKHRPDAIILDIIMPHQDG 726
Query: 822 LTVLQRLKEQASTRHIPVHIISVEDRVEAAMHMGAVGYAVKPTSREELKEVFARLEAKLT 881
+VL+ LK IPV + ++ E + +GAV Y KP ++L
Sbjct: 727 WSVLRALKNDPELCTIPVILATILADRELGLSLGAVEYLTKPIDTDKLVRTIETFGGG-- 784
Query: 882 QKLKH-ILLVEDDDLQRESIARLIGDDDVEITAVAMAQDALALLRQNIYDCMIIDLKLPD 940
KH +L+V+DD RE + R++ + L ++++ + +++DL +P+
Sbjct: 785 ---KHDVLVVDDDQASREFLRRILVKRKWTVHEAGDGIRGLEMMKRILPRLVLLDLLMPE 841
Query: 941 MLGNELLKRMTAEDIRAFPPVIVYTGRNLTREEEADLLKYSRSIIIKGARSPERLL 996
M G + L M PV+V T ++L+ E L + +++ KGA S +L+
Sbjct: 842 MDGFQTLSEMQRIPELQNIPVVVVTSKDLSASELKWLRDRAVAVVNKGANSRSQLV 897
Score = 69.7 bits (169), Expect = 1e-15
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 985 IIKGARSPERLLDEVTLFLHKVESQLSNERQRMLKTARSRDKVFEGRKVLLVDDDVRNIF 1044
+I G + E + + ++F +V +Q ER+ A +V GR L++DD+
Sbjct: 624 MIGGVVTVESEVGKGSVFTMEVPAQC--EREADGSPAEPVPQVGSGRTALIIDDEPAARS 681
Query: 1045 ALTSALEHKGAIVEIGRNGREAIERLEQHDDIDLVLMDVMMPEMDGFEATRLIRQQPRWR 1104
+ AL G NG+E + +H D +++D++MP DG+ R ++ P
Sbjct: 682 LIAKALAEAGLASIEASNGQEGLAAARKHRP-DAIILDIIMPHQDGWSVLRALKNDPELC 740
Query: 1105 KLPIIAVTAKAMKDDQQRCLQAGANDYLAKPIDLDRLFSLIRVW 1148
+P+I T A D++ L GA +YL KPID D+L I +
Sbjct: 741 TIPVILATILA---DRELGLSLGAVEYLTKPIDTDKLVRTIETF 781
Score = 58.5 bits (140), Expect = 2e-12
Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 39/243 (16%)
Query: 888 LLVEDDDLQRESIARLIGDDDVEITAVAMAQDALALLRQNIYDCMIIDLKLPDMLGNELL 947
L+++D+ R IA+ + + + + Q+ LA R++ D +I+D+ +P G +L
Sbjct: 671 LIIDDEPAARSLIAKALAEAGLASIEASNGQEGLAAARKHRPDAIILDIIMPHQDGWSVL 730
Query: 948 KRMTAEDIRAFPPVIVYTGRNLTREEEADLLKYSRSIIIKGARSPERLLDEVTLFLHKVE 1007
+ + + PVI+ T I R L V ++
Sbjct: 731 RALKNDPELCTIPVILAT--------------------ILADRELGLSLGAVEYLTKPID 770
Query: 1008 SQLSNERQRMLKTARSRDKVFEGRK--VLLVDDD-VRNIFALTSALEHKGAIVEIGRN-- 1062
+ ++++T + F G K VL+VDDD F ++ K + E G
Sbjct: 771 TD------KLVRTIET----FGGGKHDVLVVDDDQASREFLRRILVKRKWTVHEAGDGIR 820
Query: 1063 GREAIERLEQHDDIDLVLMDVMMPEMDGFEATRLIRQQPRWRKLPIIAVTAKAMKDDQQR 1122
G E ++R+ LVL+D++MPEMDGF+ +++ P + +P++ VT+K + + +
Sbjct: 821 GLEMMKRILPR----LVLLDLLMPEMDGFQTLSEMQRIPELQNIPVVVVTSKDLSASELK 876
Query: 1123 CLQ 1125
L+
Sbjct: 877 WLR 879