Pairwise Alignments

Query, 408 a.a., Response regulator/sensor histidine kinase from Pseudomonas putida KT2440

Subject, 1169 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  136 bits (343), Expect = 3e-36
 Identities = 89/271 (32%), Positives = 144/271 (53%), Gaps = 10/271 (3%)

Query: 127 LFRQRKVLGRQLEALEQSRQEQELLLSQLQVARCELEHAVRMRDDFMSIVSHEVRTPLNG 186
           L  Q + L RQ + +++  Q        L+    EL+ A R + +F++ +SHE+RTPLN 
Sbjct: 450 LAEQTEALARQRDQMDEKNQRLNEAQLMLEQRADELQRASRYKSEFLANMSHELRTPLNS 509

Query: 187 LILETQLRKMHLARGNLDAFSVDKLQAMVERDERQINSLIRLVEDMLDVSRIRTGKLSLR 246
            ++  +L   + A GNL    V   +++        N L+ L+ D+LD+S++  GK  + 
Sbjct: 510 SLILAKLLADNPA-GNLSDEQVQFARSIYSAG----NDLLTLINDILDISKVEAGKFEVH 564

Query: 247 PKLFDLGQLVRGLVENFTAQAMALETHIELQRCEALKGEW--DEFRIEQVVANLLSNAMR 304
           P+L  L +LV G+   F  QAM       ++  + L      D  R+EQ++ NLL+NA +
Sbjct: 565 PELTILSRLVDGMKNLFLPQAMERSLQFSVELADDLPASLFTDRQRLEQILKNLLANAFK 624

Query: 305 YGERNPVQVRVFEQGG-MAWVQVQDHGIGISAANQQRIFQQFERV--AAQQASGGLGLGL 361
           + E+  V +RV  +   +    V+D GIGI+   Q  IF+ F +      +  GG GLGL
Sbjct: 625 FTEKGSVTLRVEPRDDDLLAFAVRDTGIGIAQEQQAVIFEAFRQADGTTNRRYGGTGLGL 684

Query: 362 YISEQIVQAHGGRIQVESEEGKGATFTLQLP 392
            IS ++    GG+I+V+S  G G+TFTL +P
Sbjct: 685 SISRELANLLGGQIEVQSAPGAGSTFTLVVP 715



 Score = 49.7 bits (117), Expect = 5e-10
 Identities = 34/119 (28%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 8    KLLIVDDLPENLLALDALIQGEDREVHQAQSA-EAALSLLLEHEFALAILDVQMPGMNGF 66
            K+L+VDD   N+ AL + ++ +   V  A++  EA   L  + +  L ++D+ MP M+GF
Sbjct: 1046 KILVVDDDVRNVFALTSALEQKGALVEIARNGLEAIDKLQHDTDIDLVLMDIMMPEMDGF 1105

Query: 67   ELAELMRGTDKTKHIPIVFVSAAGREMNYAFKGYESGAVDFLHKPLDTLAVKSKVSVFV 125
               + +R   +   +PI+ V+A   + +   +   +GA D+L KP+D   + S + V++
Sbjct: 1106 TAMQEIRKDVRFAKLPIIAVTAKAMKDDQD-RCLSAGANDYLAKPIDLDRLFSLIRVWL 1163



 Score = 41.2 bits (95), Expect = 2e-07
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 4/103 (3%)

Query: 9   LLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHEFALAILDVQMPGMNGFEL 68
           +L+++D P+    L  L          AQ+A+      L+++    +LD+++P  +G  +
Sbjct: 779 VLVIEDEPQFARILHDLAHELQYSCLLAQNADDGFDTALQYKPDAILLDMRLPDHSGLTV 838

Query: 69  AELMRGTDKTKHIPIVFVSAAGREMNYAFKGYESGAVDFLHKP 111
            E ++    T+HIP+  VS   R+        + GAV +  KP
Sbjct: 839 LERLKENPATRHIPVHVVSVEDRKE----AAMQMGAVGYAMKP 877



 Score = 39.3 bits (90), Expect = 6e-07
 Identities = 23/83 (27%), Positives = 41/83 (49%)

Query: 2   LSHTTAKLLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHEFALAILDVQMP 61
           L+    ++L+V+D      ++  LI+  D E+   +    AL  L +  F   I+D+++P
Sbjct: 894 LAQKVKRILLVEDDALQRESMSRLIEDVDIEITAVEFGAQALEQLRDTVFDCMIIDLKLP 953

Query: 62  GMNGFELAELMRGTDKTKHIPIV 84
            M+G EL E M   D     P++
Sbjct: 954 DMDGSELLERMAKEDICSFPPVI 976