Pairwise Alignments

Query, 408 a.a., Response regulator/sensor histidine kinase from Pseudomonas putida KT2440

Subject, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (300), Expect = 2e-31
 Identities = 88/281 (31%), Positives = 145/281 (51%), Gaps = 28/281 (9%)

Query: 131 RKVLGRQLEALEQSRQEQELLLSQLQ-----------VARCELEHAVRMRDDFMSIVSHE 179
           ++ L +  E LE+  +++   LS++             AR + E A R +  F++ +SHE
Sbjct: 421 KRELQQHKEHLEELVEQRTCQLSEMNHKLNQEVLNHAKARQQAEQASRAKSAFLATMSHE 480

Query: 180 VRTPLNGLILETQLRKMHLARGNLDAFSVDKLQAMVERDERQINSLIRLVEDMLDVSRIR 239
           +RTP+NG++   +L +        D       Q  V+   R   SL+ ++ D+LD S+I 
Sbjct: 481 IRTPMNGVLGTARLLQ--------DTTLTSTQQHYVQVINRSGRSLLAILNDVLDYSKIE 532

Query: 240 TGKLSLRPKLFDLGQLVRGLVENFTAQA----MALETHIELQRCEALKGEWDEFRIEQVV 295
            G L +    FDL +LV    E   ++A    + L  HI+    +  +G  DE RI QV+
Sbjct: 533 AGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQYWQG--DEIRIGQVL 590

Query: 296 ANLLSNAMRYGERNPVQVRV--FEQGGMAWVQVQDHGIGISAANQQRIFQQFERV-AAQQ 352
            NL+ N +++ ++  V++R+     G      V+D GIGI+   Q  +F  F +  A ++
Sbjct: 591 NNLVGNGIKFTDQGEVRIRIRLAPDGQGIRFAVEDSGIGIAEEEQATLFDAFTQADAGRR 650

Query: 353 ASGGLGLGLYISEQIVQAHGGRIQVESEEGKGATFTLQLPL 393
             GG GLGL IS ++VQA GG +Q+ S+ G+G+ F   LPL
Sbjct: 651 KLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPL 691



 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 7   AKLLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHEFALAILDVQMPGMNGF 66
           A +L+V+D   N L     +     +V  A+S + A     +  F +A+LD+ +P  NG 
Sbjct: 710 ANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGV 769

Query: 67  ELAELMRGTDKTKHIPIV-FVSAAGREMNYAFKGYESGAVD-FLHKPL 112
           +L   +R  + + H  ++ F++ +    N    GY +   D +L KPL
Sbjct: 770 DLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPL 817