Pairwise Alignments

Query, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 335 a.a., DNA-binding domain-containing protein, AraC-type from Dechlorosoma suillum PS

 Score =  172 bits (437), Expect = 9e-48
 Identities = 108/331 (32%), Positives = 171/331 (51%), Gaps = 4/331 (1%)

Query: 4   SDSVAVYFLNAMLHALRDTPAERDAQLLAVGIAPQLLDQPLARVPAKAFAQLWLALIQRL 63
           S +V + F++ +L      P  R A +   GIAP LL    ARV  + FA L+  L + L
Sbjct: 6   SSTVPISFVHHLLAGTAIEPPRRTALVEQAGIAPALLAADTARVTTEQFATLYRLLAREL 65

Query: 64  DDEFFGLDSHGMPLGSFALICRGLILEPNLEKALRQCMGGFGLFLRDLRGSLTVRGGRAV 123
           DDE  G+ S  +  G+F  +C  L+   NL+ AL +    F L L D    L+ +GG   
Sbjct: 66  DDELPGMFSRPVRAGAFKFLCLSLLESANLQTALFRFTRFFHLLLDDFAIDLSRQGGLVR 125

Query: 124 ISVQSNIADPLTRVYAEETYLVLMIGMLCWLAGRRIAIDRTELAVSRPAQEDD-LLLWGP 182
           I++           + +E  L L+ G+  WL G ++ + R + A  RP    + + L+  
Sbjct: 126 IALIPQTPAAPANTFGQEIMLKLIHGVASWLTGHKMTLARVDCAYPRPRHASEYVFLYPG 185

Query: 183 DLRLGSGRTEVEFDSAYLRLPVVQDRAALKTFLRSAPQG-LVIRFRNQNGLVAEVYRHLR 241
            +    G++ + F+++ L  P+ QD+ +L TFL  AP G L + F  +  LV++  R   
Sbjct: 186 PVHFDQGQSALYFEASALATPIRQDKNSLGTFLSKAPGGWLFVSFAER--LVSQKVRETL 243

Query: 242 ALRYGQWPTLAALAQQQGISASTFRRQLEREGRSYQQIKDEVRRAMAFERLREGALSIAE 301
             +     ++  +A+    S  +  R L  EG ++Q IKDE+RR +A +RL +  + IA 
Sbjct: 244 EKQLEHSLSIETVARSLHTSVRSLTRHLATEGTTFQAIKDELRRDVAIQRLTQTDMPIAV 303

Query: 302 IAEQAGFQEPSAFHRAFKKWTGQSPGSYRAR 332
           I    GF +P+ FHRAF+KWTG +PG+YR R
Sbjct: 304 IGTAVGFDDPTTFHRAFRKWTGSTPGAYRLR 334