Pairwise Alignments

Query, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 349 a.a., transcriptional regulator, AraC family from Marinobacter adhaerens HP15

 Score = 81.3 bits (199), Expect = 4e-20
 Identities = 86/347 (24%), Positives = 144/347 (41%), Gaps = 38/347 (10%)

Query: 7   VAVYFLNAMLHALRDTPAERDAQLLAVGIAPQLLDQPLARVPAKAFAQLWLALIQRLDDE 66
           ++V +++A+L A     A          +  Q L  P AR+    F +L  A I      
Sbjct: 18  ISVLYVSALLRAAEAEGASSAELASRFQLNHQTLTSPEARISIPRFMRLGHAAINET--- 74

Query: 67  FFGLDSHGMPLGSFALICRGLILEPNLEKALRQCMGGFGLFLRDL--RGSLTVRGGRAVI 124
             G  + G+ +G+ +       ++  +     +  G  G  L  L     LT R  R V 
Sbjct: 75  --GNPALGLRMGALSRP-----VDAGIAGLAGETAGTAGAALATLIRYALLTSRNSRGVP 127

Query: 125 SVQSNIADPL---TRVYAEETYLVLMIGMLCW------LAGRRIAIDRTELAVSRPAQED 175
           +VQ           R Y    Y V+   +  W      + GR   +++  +      Q+D
Sbjct: 128 TVQPETRQAKFYSIRPYNGFNYFVVDSVLAAWTQFLRTVTGRYDVLEKVTIEYRSIGQDD 187

Query: 176 DLLLWGPDLRLGSGRTEVEFDSAYLRLPVVQD---------RAALKTFLRSAPQGLVIRF 226
               W         R  V+F ++   L V QD         + A+   L    +  + + 
Sbjct: 188 LFESWF--------RCPVQFGASNNSLTVRQDIWESASQQAQPAMHEKLSDLCERELQQI 239

Query: 227 RNQNGLVAEVYRHLRALRYGQWPTLAALAQQQGISASTFRRQLEREGRSYQQIKDEVRRA 286
           R        V   L  L  G+ P+L  +A + GI+  T +RQL  EG  ++++ DE R+ 
Sbjct: 240 RRGWTTGDRVKNLLTPLFRGETPSLETIAVKLGIAPWTLQRQLAAEGTGFRELVDETRKQ 299

Query: 287 MAFERLREGALSIAEIAEQAGFQEPSAFHRAFKKWTGQSPGSYRARL 333
           +A + +RE   S+AEIA   GF  P+AFH+A+++W   SPG +R ++
Sbjct: 300 LARDYIRETETSLAEIAWLLGFANPAAFHKAYRRWFNLSPGEHRKQI 346