Pairwise Alignments

Query, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 338 a.a., AraC family transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score =  210 bits (535), Expect = 4e-59
 Identities = 114/329 (34%), Positives = 177/329 (53%), Gaps = 1/329 (0%)

Query: 3   ESDSVAVYFLNAMLHALRDTPAERDAQLLAVGIAPQLLDQPLARVPAKAFAQLWLALIQR 62
           E  +V+V  +N  +   R    +    + A GI PQ+L QP +RV +  +  LW  + Q 
Sbjct: 5   EKGTVSVSLVNEAVARARAHGVDMQPIMAAAGITPQMLAQPRSRVSSAQYGALWAGIAQA 64

Query: 63  LDDEFFGLDSHGMPLGSFALICRGLILEPNLEKALRQCMGGFGLFLRDLRGSLTVRGGRA 122
           +DDEFFG D+H M  GSF  + +  +      +AL +  G   L L DL   +     R 
Sbjct: 65  MDDEFFGQDAHPMRWGSFVAMTQAALTARTGRQALARATGFLRLVLDDLHVRVEEDDQRV 124

Query: 123 VISVQSNIADPLTRVYAEETYLVLMIGMLCWLAGRRIAIDRTELAVSRPAQEDDL-LLWG 181
            +         +  ++   T+L+++ G++CWL GRRI         + P    +  L++ 
Sbjct: 125 RLVFVHRKGTRVPPMFTYATWLIMVYGLVCWLVGRRIPFIAARFRCAAPPDAQEYRLMFC 184

Query: 182 PDLRLGSGRTEVEFDSAYLRLPVVQDRAALKTFLRSAPQGLVIRFRNQNGLVAEVYRHLR 241
            D+      + V+   A+L LPV+Q  A++KTFLR AP   ++++RN +   A V + LR
Sbjct: 185 DDMAFKHDASFVDLSPAFLELPVIQTAASIKTFLRDAPGNFIVKYRNPDSFAARVRKTLR 244

Query: 242 ALRYGQWPTLAALAQQQGISASTFRRQLEREGRSYQQIKDEVRRAMAFERLREGALSIAE 301
            L    WP   A+A +  ++ +T RR+L+ EG +YQ IKD++RR +A  +L++   +IA+
Sbjct: 245 NLPVASWPASDAMALKLNVAEATMRRRLKLEGHTYQSIKDDLRRDIAIGQLQDTRRTIAD 304

Query: 302 IAEQAGFQEPSAFHRAFKKWTGQSPGSYR 330
           IA   GF EPSAFHRAF+KWTG  P  YR
Sbjct: 305 IAIAVGFAEPSAFHRAFRKWTGMRPTDYR 333