Pairwise Alignments

Query, 477 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 480 a.a., transcriptional regulator, GntR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  218 bits (556), Expect = 3e-61
 Identities = 158/442 (35%), Positives = 220/442 (49%), Gaps = 31/442 (7%)

Query: 1   MELHIRLEGRKGLADQLYQQLRDGIDSGHLAAGSQLPPTRLLAEQLGVSRKTVAEAYSRL 60
           M L + ++G   L  QLY++L+  I  G LAAG++LP +R LA +LGVSR TV +AY +L
Sbjct: 1   MWLPLDVDGPLSLGRQLYERLKQMILDGELAAGARLPSSRALAVELGVSRNTVLDAYDQL 60

Query: 61  TYDNLLSGVVGRGTFVTPRHPLRSNES----ATLPLAGAASLERWQQRATVLSQRQLQAP 116
           + +  L    G GT V         E     A   +A AA  ER               P
Sbjct: 61  SAEGYLETRHGSGTRVAAGIVSERGEGGANRAPFVIAPAAVPER---------------P 105

Query: 117 SRY-DFVGGASSKAQFPFDQWRSCLNYALRRSQRHPERQFPAQGLPELREAIAHHIAYSR 175
           S    F  G  +   FP ++W                R     G+  LREAIA ++  +R
Sbjct: 106 SGVVSFRSGIPALDVFPREEWARTYQRVCAALPDDALRYSAPAGVWALREAIAGYLRRTR 165

Query: 176 GVHCSAADLLVCNGAQQALDLIARVLVEPGCQVAMEDPGYPPARQLFLALGARLQSVPVD 235
           G+ C A  +++ +GA Q L +++R+L   G  V  EDP +   R++    G R++ VPVD
Sbjct: 166 GIRCHAERVMITSGATQGLRIMSRLLQRSGGVVLAEDPAHAGLREVLEVTGLRVEGVPVD 225

Query: 236 DEGLCVEQIAD-------GTRLIYVTPSHQFPLGMPMSEPRRHALLARAAELGALIIEDD 288
           D G+    +         G   +YVTPSHQ+PLG  +   RR AL+  A E   LI+EDD
Sbjct: 226 DRGMDTGMLPSAEEARRAGVAFVYVTPSHQYPLGGILPVQRRQALVRFAREAECLIVEDD 285

Query: 289 YDCEFRYHGPASDALQRLDRHGLVAYVGTFSKTLLPELRLGYAVLPPAVLQAACVAKHLS 348
           YD EFR+ G     L  L    +V Y+G+FSK L P LRLG+A+LP  +L A    K  S
Sbjct: 286 YDGEFRHEGSPVGTLHELAPESVV-YLGSFSKVLAPALRLGFAILPARLLAAWHREKLYS 344

Query: 349 DWHSPTLLQWALARFLGEGHLNKHIRRCHEVYSARRERILARLGGDLAPWFSAIPASAGF 408
           D H+  L Q ALA F+G G L +HI R  ++Y  RR  ++  L             + G 
Sbjct: 345 DVHTDALSQHALASFIGSGALERHIWRMKKLYRRRRAFLVKSLMRHFGDAVGIRGHATGL 404

Query: 409 HLSALATPGV--DVELLANLAR 428
           HL A  T GV  D ++++ LAR
Sbjct: 405 HLVAAFT-GVRFDDKVMSELAR 425