Pairwise Alignments

Query, 631 a.a., transpeptidase (penicillin-binding protein 2) from Pseudomonas putida KT2440

Subject, 648 a.a., penicillin-binding protein 2 from Phaeobacter inhibens DSM 17395

 Score =  375 bits (963), Expect = e-108
 Identities = 237/612 (38%), Positives = 340/612 (55%), Gaps = 15/612 (2%)

Query: 7   LKDHEKEKHLVNRRLLACAAMVFSLCAVLVGRLYVLQVLQHDQQTAVSENNRVHVLPIAP 66
           +KD E     ++RR L    +  +    L  R+  LQV Q DQ   ++E NR+++  I P
Sbjct: 5   VKDVEASHRKLSRRALLLGGLQLAFAGGLAMRMRHLQVDQADQFRLLAEENRINLRLIPP 64

Query: 67  ERGLIYDRNGVVLADNKPSFDLTMTRERAGGDSAKVLDTLTQVLGLTEDDRKQFDKDLRR 126
            RG IYDRNG +LA N  S+ +T+  E AG D   V+  L+++L L  +D ++   ++RR
Sbjct: 65  ARGQIYDRNGTILAQNAQSYRITVVPEDAG-DVGDVIGKLSRLLTLDPEDIERAMAEMRR 123

Query: 127 GRKPFEPVTLMVGLSEEQIALVAVNQFRLPGLEVEPQFIREYPLAGHFAHSVGYVGRINE 186
              PF P+TL   +S + I+ VAVN   LPG+  E    R YP    FAH VGYVG +++
Sbjct: 124 S-PPFLPITLADQISWDDISKVAVNAPALPGITPEVGLTRVYPQQEDFAHVVGYVGPVSD 182

Query: 187 KEAKTLDSTE---YRGTQSIGKTGIERFYESQLHGHVGYEEVETNAQGRVMRVLNHKDPT 243
            +   ++  E         IGK G E   E  L G  G + VE NA GRVMR L+ ++  
Sbjct: 183 YDLSKMEDPEPVLMIPRFQIGKVGFEAKREDVLRGKAGAKRVEVNATGRVMRELDRREGE 242

Query: 244 PGQDIVLTLDAHLQIAAEKALGDRRGSVVVLDPANGDVLAMVSNPSFDPNLFVKGISFKQ 303
            G D+ LT+DA LQ   +  LG    S VV+D  +GDV A+ S+PSFDPNLFV+GIS   
Sbjct: 243 AGADMQLTVDADLQYYTQARLGKESASAVVIDCESGDVRAIASSPSFDPNLFVRGISVAD 302

Query: 304 YAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVITPGSRVFDPGYYELPNYDH 363
           Y  L +   RPL N+ ++G Y PGST K   A+A L+ G+I     V+ PG+ E+     
Sbjct: 303 YRMLTEDPYRPLANKSVQGTYPPGSTFKMITALAALEEGLIGTEDTVWCPGHLEVSG--R 360

Query: 364 KYRNWNRSGDGWVDMYTAIMRSNDTYFYDLAHKLGIDRLHDYMAEFGLGQKVSLDMFEEA 423
           ++  W R+G G VD+ T++  S D Y+YDLA K+GID++      FGLG +  L M   A
Sbjct: 361 RFHCWKRAGHGHVDLNTSLKSSCDVYYYDLAIKVGIDKISAMAKRFGLGVRHDLPMSAVA 420

Query: 424 SGLMPSAEWKRATRRQAWFPGETLILGIGQGYMQVTPLQLAQATSLLASKGVWHRPHLAM 483
            G+ P+ EWK  T  Q W  G+T+   IGQGY+  +P+QLA  T+ LA+ G    P L  
Sbjct: 421 KGIAPNKEWKSRTYGQDWLVGDTVNSSIGQGYLLASPMQLAVMTARLAT-GRSVTPRLLK 479

Query: 484 TVGGDTPIDPNPMPDIVLHDKHAWDQVSQGMQMVMHDPRGIA-RAAAAGAQYRIAGKSGT 542
           ++ G     P+   + +  +++    + +GM  V ++ RG   R+       R+AGKSGT
Sbjct: 480 SIDGVE--QPSGAGEPIGVNENNLRTIRRGMYSVSNERRGTGYRSRIIADGMRMAGKSGT 537

Query: 543 AQVVAIKQGER---YNRNKTLE-RHRDNALFVGFAPAEHPSVVVAVMIENGEAGGRVAGP 598
           +QV  I   ER     RN+ L    RD+ALFV +APA+ P   VAV++E+G  G + A P
Sbjct: 538 SQVRNITAAERAAGVIRNEDLPWERRDHALFVAYAPADDPKFAVAVVVEHGGGGSKAAAP 597

Query: 599 VVREVMDAYLLD 610
           + R+V+   L D
Sbjct: 598 IARDVLLQALYD 609