Pairwise Alignments

Query, 631 a.a., transpeptidase (penicillin-binding protein 2) from Pseudomonas putida KT2440

Subject, 634 a.a., peptidoglycan DD-transpeptidase MrdA from Pantoea sp. MT58

 Score =  481 bits (1239), Expect = e-140
 Identities = 255/624 (40%), Positives = 377/624 (60%), Gaps = 10/624 (1%)

Query: 8   KDHEKEKHLVNRRLLACAAMVFSLCAVLVGRLYVLQVLQHDQQTAVSENNRVHVLPIAPE 67
           +D+  E+ L  RR       +  L ++LV  LY LQ+L+ D  +  S  NR+ ++P+AP 
Sbjct: 9   RDYSAEQKLFVRRAFIAFVGILLLSSILVVNLYHLQILRFDDYSTRSNQNRIKLVPVAPS 68

Query: 68  RGLIYDRNGVVLADNKPSFDLTMTRERAGGDSAKVLDTLTQVLGLTEDDRKQFDKDLRRG 127
           RG+IYDR G  LA N+  +   +  E+   +  + L+ L  VL LT++D + F K+ +R 
Sbjct: 69  RGIIYDRTGTPLALNRTIYQAELVPEKVD-NLQQTLENLRPVLELTDEDLENFQKERKRS 127

Query: 128 RKPFEPVTLMVGLSEEQIALVAVNQFRLPGLEVEPQFIREYPLAGHFAHSVGYVGRINEK 187
           R+ F  + +  GL+E Q+A  AVNQ+R PG+EV+    R YP      H VGYV +IN++
Sbjct: 128 RR-FTSIPVKTGLNEVQVARFAVNQYRFPGVEVKGYQRRYYPYGATLTHVVGYVSKINDR 186

Query: 188 EAKTLDST----EYRGTQSIGKTGIERFYESQLHGHVGYEEVETNAQGRVMRVLNHKDPT 243
           +   LD       Y  T  IGK GIE +YES LHG  G+EEVE N +GRV+R L+ + P 
Sbjct: 187 DVARLDKEGIWPNYAATHDIGKLGIEAYYESLLHGKTGFEEVEVNNRGRVIRQLHEESPQ 246

Query: 244 PGQDIVLTLDAHLQIAAEKALGDRRGSVVVLDPANGDVLAMVSNPSFDPNLFVKGISFKQ 303
            G+DI LT+D  LQ   E  L   R +VVV DP  G++LAMVS PS+D NLFV GIS K 
Sbjct: 247 AGRDIYLTIDLKLQQYVETLLAGSRAAVVVSDPRTGEILAMVSTPSYDANLFVDGISSKD 306

Query: 304 YAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVITPGSRVFDPGYYELPNYDH 363
           Y  L +  +RPL+NR ++  Y P STVKP VA++ + +GVI   + +FDPG+++LP  + 
Sbjct: 307 YRGLLEDENRPLYNRAIQAAYPPASTVKPYVAVSAMSAGVINRNTSLFDPGWWQLPGSEK 366

Query: 364 KYRNWNRSGDGWVDMYTAIMRSNDTYFYDLAHKLGIDRLHDYMAEFGLGQKVSLDMFEEA 423
           ++R+W + G G +++  A+  S DT+FY +A+ +GIDRL ++M +FG G +  +D+ +E+
Sbjct: 367 RFRDWKKWGHGRLNVTKALEESADTFFYQVAYDMGIDRLSEWMNKFGYGSRTGIDLPQES 426

Query: 424 SGLMPSAEWKRATRRQAWFPGETLILGIGQGYMQVTPLQLAQATSLLASKGVWHRPH-LA 482
           +G MP+ +WK    ++ W+ G+T+ +GIGQGY   TPLQ+ +A  +L + GV   PH L 
Sbjct: 427 AGNMPTRDWKMKRFKKPWYQGDTIPVGIGQGYWTATPLQMNKAMMILINDGVVKVPHMLR 486

Query: 483 MTVGGDTPIDPNPMPDIVLHDKHA--WDQVSQGMQMVMHDPRGIARAAAAGAQYRIAGKS 540
            T  G T +     P+  + D H+  W+    GM  V + P G A  + A A Y+IA KS
Sbjct: 487 ATREGRTLVPYRQPPEAPIGDIHSGFWEIAKDGMYGVANRPNGTAHKSFADAPYKIAAKS 546

Query: 541 GTAQVVAIKQGERYNRNKTLERHRDNALFVGFAPAEHPSVVVAVMIENGEAGGRVAGPVV 600
           GTAQV  +K+ E YN +K  ER RD+ L   FAP + P V V +++ENG AG  V G V+
Sbjct: 547 GTAQVFGLKENETYNAHKIAERLRDHKLMTAFAPYDKPRVAVTIILENGGAGPAV-GTVM 605

Query: 601 REVMDAYLLDEQGHLKPEYAGGAP 624
           R+++D  +L +   + P+ A   P
Sbjct: 606 RQILDHIMLGDNNTVLPDAAPVPP 629