Pairwise Alignments

Query, 631 a.a., transpeptidase (penicillin-binding protein 2) from Pseudomonas putida KT2440

Subject, 678 a.a., penicillin-binding protein 2 from Sphingomonas koreensis DSMZ 15582

 Score =  317 bits (813), Expect = 8e-91
 Identities = 217/613 (35%), Positives = 323/613 (52%), Gaps = 24/613 (3%)

Query: 4   PIPLKDHEKEKHLVNRRLLACAAMVFSLCAVLVGRLYVLQVLQHDQQTAVSENNRVHVLP 63
           P+ L    ++ +  +RR L   A   +   +L  R+  L V ++D+   ++E+NRV++  
Sbjct: 4   PVRLISEAQQSYSFSRRALFLGAAQVTGGLILAARMTWLSVYENDKYRLLAESNRVNLTL 63

Query: 64  IAPERGLIYDRNGVVLADNKPSFDLTMTRERAGGDS-AKVLDTLTQVLGLTEDDRKQFDK 122
           I P RG I DR GV +A+N+  F + +  +R   +S  +VL  L  +L LT +D  + ++
Sbjct: 64  IPPRRGWIVDRAGVPIANNRTDFRVDIIPDRMEKESRGRVLAALRDLLALTAEDLVRIEE 123

Query: 123 DLRRGRKPFEPVTLMVGLSEEQIALVAVNQFRLPGLEVEPQFIREYPLAGHFAHSVGYVG 182
           DL+ G   F+PV +   L  E+ A V+V    LPG+     F R YP     AH VGYVG
Sbjct: 124 DLK-GAAGFQPVQVAENLDWERFAAVSVRLPELPGVAPTRGFARNYPAGAAVAHLVGYVG 182

Query: 183 RINEKEAK-TLDSTEYRGTQSIGKTGIERFYESQLHGHVGYEEVETNAQGRVMRVLNHKD 241
               ++ K + D         +GK G+E+  E +L G  G + VE  A+G+++R L  + 
Sbjct: 183 AATAEQFKASKDPLLLTPGFKLGKDGLEKVLEGELRGKPGAKRVEVTARGKLVRELATRP 242

Query: 242 PTPGQDIVLTLDAHLQIAAEKALGDRRGSVVVLDPANGDVLAMVSNPSFDPNLFVKGISF 301
             PG+ + LT+DA LQ  A + LG+  GSV V D  NGD+LAMVS P++DPN F  GIS 
Sbjct: 243 DEPGKTVRLTIDAGLQEYAARRLGNESGSVTVFDVTNGDILAMVSMPAYDPNAFSDGISR 302

Query: 302 KQYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVITPGSRVFDPGYYELPNY 361
            ++  L +    PL N+ L+GLY PGST KP  A+A L +G I P   V+  G Y+L N 
Sbjct: 303 TEWKMLSEDDHLPLMNKTLQGLYPPGSTFKPATALAILSAG-IDPKRVVYCNGGYQLGN- 360

Query: 362 DHKYRNWNRSGDGWVDMYTAIMRSNDTYFYDLAHKLGIDRLHDYMAEFGLGQKVSLDMFE 421
             ++    R G   + M+TAI RS +TYFY L  ++GI+ +     + G G +  L +  
Sbjct: 361 -RRFGCLGRHGP--MTMHTAIARSCNTYFYTLGREIGIEAIAAAARKLGFGAEFELPLPS 417

Query: 422 EASGLMPSAEWKRATRRQAWFPGETLILGIGQGYMQVTPLQLAQATSLLASKGVWHRPHL 481
           +  G +P + WK    +Q W   +TL   IGQGY+ V+P QLA + + +AS        L
Sbjct: 418 QRYGTIPDSAWKMRRYKQEWTQADTLNAAIGQGYVLVSPFQLALSAARIASGHELIPSLL 477

Query: 482 AMTVGGDTPID-PNPMPDIVLHDKHAWDQVSQGMQMVMHDPRGIARAAAAGAQ-YRIAGK 539
           A        +D P     IV   +   D+V  G        RG A A+       R+ GK
Sbjct: 478 AAKRAAPRHLDFPEEHLAIV---RAGMDEVVNG--------RGTAGASKLRLDGIRMGGK 526

Query: 540 SGTAQVVAIKQGERYNRNKTLERHRDNALFVGFAPAEHPSVVVAVMIENGEAGGRVAGPV 599
           +GTAQV  I    R    +   ++RD+ LFV FAP ++P    +V+IE+G  G R A PV
Sbjct: 527 TGTAQVRRIMDRNRGQGGEW--KYRDHGLFVCFAPVDNPRYAASVVIEHGMGGARAAAPV 584

Query: 600 VREVMDAYLLDEQ 612
            ++V+  +L D Q
Sbjct: 585 AKDVL-TWLFDRQ 596