Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 422 a.a., porin from Pseudomonas fluorescens FW300-N2E3

 Score =  404 bits (1039), Expect = e-117
 Identities = 219/418 (52%), Positives = 272/418 (65%), Gaps = 10/418 (2%)

Query: 7   TLARSV-LAVSLAFGLGLPAWAQEGGFLEDAKGGLTLRNYYFNRDFRD-PGAAK-GKVEE 63
           TL  +V LAV   F  GL   A EGGF+EDA   L  RNYYF+RDF D  GA K  K EE
Sbjct: 7   TLGSAVSLAVVSGFSSGL--MAAEGGFIEDASATLQARNYYFSRDFSDIVGANKQSKAEE 64

Query: 64  WAQGFIFKFSSGYTPGLIGFGLDGIALFGVKLDSGGGTSGSELLPVHDDGRAADDYGRAG 123
           WAQGFI    SGYT G IG G+D I L G+KLDS      + LLPV  DGRAADDY R  
Sbjct: 65  WAQGFILNVKSGYTQGTIGVGVDVIGLLGLKLDSSPDRVNTGLLPVQSDGRAADDYSRLA 124

Query: 124 LAAKLRMSATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVS 183
            A KLR S TELKVGEL P++P+L + D RLLP T++GA + S EI GL+LQAG     S
Sbjct: 125 GALKLRYSKTELKVGELQPNLPVLAFSDIRLLPPTYQGASISSSEISGLTLQAGHLSSTS 184

Query: 184 LRHSSDMQDLSAWAA----PGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFN 239
           LR+ S  Q + A          +SDGFN+AGA+Y FN +RT + AW+ QLEDIY Q +  
Sbjct: 185 LRNESGEQKMQAMLGHVPQRQASSDGFNFAGADYAFNDKRTSVSAWYGQLEDIYNQRFLG 244

Query: 240 LLHSQRVGEWTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGD 299
           L HS+ +G+WTLGANLGY+   +DG+  +G+I +R  ++LLSA H GHT Y+G Q + GD
Sbjct: 245 LKHSEPMGDWTLGANLGYYDSHEDGKKLLGNIDNRAFFSLLSAKHGGHTFYVGYQGMYGD 304

Query: 300 SQWMSVYGSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENAT 359
           S +  V+ +    LGN++    F+  DERSWQ RYDY+FAALGVPGL + VRY  G N  
Sbjct: 305 SAFPRVFANIS-PLGNEVPTYEFAYTDERSWQARYDYDFAALGVPGLTSTVRYITGNNVD 363

Query: 360 TAAGSNGKEWERDAEVNYTFQSGALKNLNIRLNNATNRRSFNSDLDQTRLIVSYPLTL 417
           T  G  GK+ ERD ++ Y  QSG LK L IR+ NA  R ++ SD+D+ RLI+SY  TL
Sbjct: 364 TGKGFEGKDRERDLDLGYVLQSGTLKGLGIRVRNAVARSNYRSDIDENRLILSYTWTL 421