Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 439 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  256 bits (653), Expect = 1e-72
 Identities = 153/435 (35%), Positives = 233/435 (53%), Gaps = 32/435 (7%)

Query: 11  SVLAVSLAFGLGLPAWAQEG---GFLEDAKGGLTLRNYYFNRDFRD--PGAAKGKVEEWA 65
           S+ A+SLA G   P +AQ     GF+E +   L  RN+YFNRDFRD    A  G  EEWA
Sbjct: 8   SLTALSLALG-SAPVFAQSETAEGFIEGSTLSLINRNFYFNRDFRDGESAAGNGYSEEWA 66

Query: 66  QGFIFKFSSGYTPGLIGFGLDGIALFGVKLDSGGGTSGS----ELLPVHDDGRAADDYGR 121
            G +  F SGYT G +G G D  A+ G+KLDSG G SG     +LLP    G   DD+ R
Sbjct: 67  HGLMAFFESGYTQGSVGIGFDAFAMLGLKLDSGSGRSGVGGSIDLLPHDSAGDPEDDFTR 126

Query: 122 AGLAAKLRMSATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYRE 181
            G A K R+  TE+K G++ P  P++ + D RLLP++F+G  + +  ++ L+LQ G+   
Sbjct: 127 VGGAVKARLLDTEIKAGDVFPTTPVVHFGDSRLLPESFKGVTVVNNSLDDLTLQGGRLHA 186

Query: 182 VSLRHSSDM-QDLSAWAAPGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNL 240
           +S  ++S+M +D   +   GV +    YAG +Y  N+  +L   + S+L+D + Q YF  
Sbjct: 187 MSQPNTSNMNEDFVTFYGGGVDAPWLGYAGGDYSVNENISL-SLYTSRLKDAWNQHYFGA 245

Query: 241 LHSQRVGE-WTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGD 299
             +  + +   L A+  Y+   D+G+  +G+  +    + L  +   HT+    Q+ +G+
Sbjct: 246 SATYPLSDIVALLASFNYYKATDEGRELLGEFNNNIWSSSLGVAFGAHTVTASYQRNNGN 305

Query: 300 SQWMSVYGSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHG---- 355
           + +  +  +    L N +   +F++  E+SW +RYD N A  G+PGL  M RY  G    
Sbjct: 306 NDFDYLRQADSIYLNNSIQYSDFNSPKEQSWMLRYDLNMAEYGIPGLTFMTRYARGWGAD 365

Query: 356 ------------ENATTAAGSNGKEWERDAEVNYTFQSGALKNLNIRLNNATNR-RSFNS 402
                       +N     G N   WERD E  Y  Q+G+LK+L++R+  AT R  +F S
Sbjct: 366 YSNANEVYMRQDDNGAPLTGQN--RWERDVEARYVVQTGSLKDLSLRVRQATTRATAFES 423

Query: 403 DLDQTRLIVSYPLTL 417
           DLD+ R I  YPL++
Sbjct: 424 DLDEVRFIAEYPLSI 438