Pairwise Alignments

Query, 352 a.a., putative ABC transporter lipoprotein from Pseudomonas putida KT2440

Subject, 425 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  257 bits (657), Expect = 3e-73
 Identities = 159/400 (39%), Positives = 216/400 (54%), Gaps = 52/400 (13%)

Query: 2   KLSAWLLLSGLLL---CGCDQPAPQSY-------AGLGQ-QAGE-------FSQVTRDHR 43
           +L + L++ GLLL    GCD  AP S        A LGQ + GE       F++VT +H+
Sbjct: 29  RLISQLIIGGLLLFMISGCDN-APASVSESKSMGALLGQTKEGETTSTQQAFAKVTPEHQ 87

Query: 44  LVFPHDHGPHDGFRIEWWYVTANLKDAQGRDWGAQWTLFRSALRP--------GPET--S 93
             FP DH  H+GFR EWWY+TANL   +G   GAQWT FR AL+P         P T  S
Sbjct: 88  FHFPQDHLAHNGFRQEWWYLTANLTTEKGEQLGAQWTQFRVALKPQYTESQNAQPTTLKS 147

Query: 94  GWNSPNLWMGHAALTAPGGHQAAETLARGGIGQAGVQAQPFRAWINDWVLQGQGG--IEQ 151
            W +  L+  H+ALT+   H A E  +RG    AGV A P++  +++W LQ +       
Sbjct: 148 AWATEQLYFAHSALTSSAAHLAHEKWSRGHPKLAGVNANPYQIHLDNWQLQSESNALFPA 207

Query: 152 LQMVASGDGFRYDLQLHSDLPLVLHGEQGYSEKSGKGQ-ASYYYSQPFYQVQGQV----- 205
           +  V + D F Y+L L S  PL   G+ GYS K+ +G  ASYYYSQPF  + GQ+     
Sbjct: 208 ILRVETAD-FSYELTLTSQAPLQYQGDNGYSIKNREGNVASYYYSQPFITITGQITRHIN 266

Query: 206 ---QRGSLCIAVTGQAWLDREWSSQPLAPGQTGWDWFSLHLDSGAKLMLFQVREAHGEPY 262
              Q  +    VTGQ WLDREWSSQ L   Q GWDWF+L L+ G+ LMLFQ+RE   +  
Sbjct: 267 INGQAENRVEKVTGQGWLDREWSSQFLTKSQQGWDWFALRLNDGSALMLFQLREQSTDKT 326

Query: 263 RAGTWV---------GPQGDVVALDAAQ-IKLQALAWSAQKNGKQVPTRWRVQVPEHGVD 312
           +  +           G   ++ + D    IK+  L W   + GK  P  W+VQ+P   +D
Sbjct: 327 QTPSAFYSARRMFADGTGRNINSRDTPDGIKMTPLGWQTTRTGK-YPVSWQVQIPSEQID 385

Query: 313 VQVDAVEPQAWMQTRFPYWEGPVRLKGSAGGRGYLEMTGY 352
           +++  + P + M     YWEGP++L GS  G GY+E+TGY
Sbjct: 386 IRISPLNPNSAMALSTSYWEGPIKLSGSHTGMGYMELTGY 425