Pairwise Alignments

Query, 260 a.a., Periplasmic amino acid-binding protein-related protein from Pseudomonas putida KT2440

Subject, 245 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score = 55.8 bits (133), Expect = 8e-13
 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 18/207 (8%)

Query: 46  GLAPTVVRELFARMGYEVQTVVLGNWKRCLMDAAAGRVDVVL-AYNSDQRDQRMRFSTEP 104
           GLA  +V    AR GY      +  W R ++    GR DV++ A+ S+ R    RFS E 
Sbjct: 44  GLATDIVSTALARAGYATDFEQVP-WARAMLGIGEGRYDVLINAWYSEDRTHIGRFSAEY 102

Query: 105 VMREEVAVFYNRK-RPVQFQQLEDLAGYRGGLLYGESYGAEFDRFVARHQNIERVSSSQQ 163
           ++     +F  RK   +QF  L+ L  Y   ++ G +Y  +FD      ++ +       
Sbjct: 103 LINR--VLFIKRKDEAIQFDSLQQLRAYPIAVVRGYAYSKDFD------EDPQMQKVPVH 154

Query: 164 NFGKLIR----GRIDYVIQERRTGLLFI--EHLPGAQDIRALPTALSVDYLRVAVSRQSP 217
           NF   +R     R+   +++      ++  E       +  LP  LS + L + VS ++P
Sbjct: 155 NFAMAVRMLAADRVKLTLEDEFVARYYLARESPKVRSAVEFLPKPLSENSLHILVSLKNP 214

Query: 218 -LSQHMAEIDAQLQRMNQAGEIARWLE 243
              Q +A  D ++  M   G  AR L+
Sbjct: 215 EHEQIVAGFDREIAAMKADGSYARLLK 241