Pairwise Alignments

Query, 260 a.a., Periplasmic amino acid-binding protein-related protein from Pseudomonas putida KT2440

Subject, 271 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score = 89.7 bits (221), Expect = 6e-23
 Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 6/235 (2%)

Query: 2   IPRAWQLALALTLPTLHASA-SEPVRYCDYPVYPPISWSDGHQVRGLAPTVVRELFARMG 60
           +P   QL  A+    L  +A  E +R    P + P  + +  Q  GL       +F R+G
Sbjct: 1   MPVIAQLLTAVLFACLSFTARGEKLRIVTEP-WAPYVYEENGQALGLDYETTAIVFQRLG 59

Query: 61  YEVQTVVLGNWKRCLMDAAAGRVDVVL-AYNSDQRDQRMRFSTEPVMREEVAVFYNRKRP 119
            EV+   L  WKRCL     G  D  L  ++S +RD  + +  EP+   E  +FY   RP
Sbjct: 60  IEVEWQFLP-WKRCLAMLDQGLADGALDIFHSSERDATLLYPGEPLSEVEFVLFYANDRP 118

Query: 120 VQFQQLEDLAGYRGGLLYGESYGAEFDRFVARHQNIERVSSSQQNFGKLIRGRIDYVIQE 179
             F+ LEDL G   G   G  Y  +F       +  E   + + NFGKL RGRID +I +
Sbjct: 119 HPFRTLEDLRGLTIGTSPGYLYSQDFRDSTLFTR--EPAPTHEANFGKLQRGRIDLLITD 176

Query: 180 RRTGLLFIEHLPGAQDIRALPTALSVDYLRVAVSRQSPLSQHMAEIDAQLQRMNQ 234
           RR G   ++ L     I   PT +S     +A+ R + +   +    A+L+R  +
Sbjct: 177 RRVGQTLLDTLKLRDQISESPTVISHQSQFLALRRNAGMDLLVQRFGAELKRFKR 231