Pairwise Alignments

Query, 260 a.a., Periplasmic amino acid-binding protein-related protein from Pseudomonas putida KT2440

Subject, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 73.2 bits (178), Expect = 5e-18
 Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 5/193 (2%)

Query: 33  YPPISWSDGHQVRGLAPTVVRELFARMGYEVQTVVLGNWKRCLMDAAAGRVDVVLAYNSD 92
           +PP   SD     G    ++ + F + GY+V+   L  W R   +   G  D    +   
Sbjct: 66  WPPFIGSDLPNY-GFVGEIITQAFTKQGYQVEFQFLP-WARAYAETQRGLYDATAIWMHS 123

Query: 93  QRDQRMRFSTEPVMREEVAVFYNRKRPVQFQQLEDLAGYRGGLLYGESYGAEFDRFV-AR 151
              +   F + PV +EE   FY  K+P  ++ L DLA Y+ G +   SYG E D  + + 
Sbjct: 124 AEREIDFFYSLPVSQEEFVFFYPVKKPFDWKTLSDLAPYKLGGVLAYSYGKELDALLDSG 183

Query: 152 HQNIERVSSSQQNFGKLIRGRIDYVIQERRTGLLFI-EHLPGAQD-IRALPTALSVDYLR 209
              +ER   + +N  KL +GR+D V +E+  G   I + +P  QD I   PT    +   
Sbjct: 184 VLTMERDGLAAKNLEKLAKGRVDLVPEEKHIGYYLINQQIPHLQDLITHHPTPFLTNSNY 243

Query: 210 VAVSRQSPLSQHM 222
           +   +QS  SQ +
Sbjct: 244 LLFPKQSARSQEL 256