Pairwise Alignments

Query, 260 a.a., Periplasmic amino acid-binding protein-related protein from Pseudomonas putida KT2440

Subject, 267 a.a., putative amino acid ABC transporter (RefSeq) from Shewanella amazonensis SB2B

 Score = 56.6 bits (135), Expect = 5e-13
 Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 27/248 (10%)

Query: 16  TLHASASEPVRYC-DYPVYPPISW--SDGHQ----VRGLAPTVVRELFARMGYEVQTVVL 68
           T +A    P+ +C +   +PP ++   DG Q    + G    V++ +F  + YEV  +  
Sbjct: 20  TANAQNESPLVFCVESTEFPPFNYFVRDGKQKTETLAGYDIEVLKHVFEDIPYEVIALP- 78

Query: 69  GNWKRCLMDAAAGRVDVVLAYNSDQRDQRMRFSTEPVMREEVAVFY---NRKRPVQFQQL 125
             W+RCLM    G VD V++ + + + +R   S+ P        F+   N   P +    
Sbjct: 79  --WRRCLMSLTTGAVDAVMSASMNDQRRRDYISSAPYYYLTPGYFFLKQNTDAPREVAAA 136

Query: 126 EDLAGYRGGL--LYGESYGAEFDRFVARHQNIERVSSSQQNFGKLIRGRIDYVIQE---- 179
           E+L  Y G L  L G +Y A F   +A  +++ R++S +Q    L  GR  + +      
Sbjct: 137 EELWQY-GALCGLGGHNY-ANFG--LAADKDVMRMASYEQLAETLKMGRCRFYLDRLELV 192

Query: 180 -RRTGLLFIEHLPGAQDIRALPTALSVDYLRVAVSRQSPLSQHMAEI-DAQLQRMNQAGE 237
             +  L+    LP  +  + L    + +   V +SR+SP S+++  + D ++  +  +G+
Sbjct: 193 APKMALMDTPPLPALE--KGLINGAAAEPFYVLISRKSPNSENLKLLFDERIALLRASGK 250

Query: 238 IARWLEQS 245
           +A+ LEQ+
Sbjct: 251 LAQILEQA 258