Pairwise Alignments

Query, 260 a.a., Periplasmic amino acid-binding protein-related protein from Pseudomonas putida KT2440

Subject, 268 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 48/236 (20%), Positives = 96/236 (40%), Gaps = 16/236 (6%)

Query: 8   LALALTLPTLHASASEPVRYCDYPVYPPISWSDGHQVRGLAPTVVRELFARMGYEVQTVV 67
           L LA +L + +    + VR C   + P    ++  Q  G A  ++  + AR+ + + ++ 
Sbjct: 16  LLLASSL-SANGQPGQSVRVCSLNLAPQTMLNEQGQPDGYAVKILEAIAARLNWRL-SIQ 73

Query: 68  LGNWKRCLMDAAAGRVDVVLAY-NSDQRDQRMRFSTEPVMREEVAVFYNRKRPVQ----- 121
              W R +  A  G  D+VL     +   Q M F  EP++ +   +   +   +Q     
Sbjct: 74  YYPWVRVVHLAQQGDCDIVLTVLMREDYAQYMAFPAEPILMQRNVIAVRKGSHMQYDGNM 133

Query: 122 --FQQLEDLAGYRGGLLYGESYGAEFDRFV-ARHQNIERVSSSQQNFGKLIRGRIDYVIQ 178
             F +   +A YR      ++   EF ++  A   NI+    ++ NF  L+  R++ V +
Sbjct: 134 ANFVRKHSIAMYRD-----KAINDEFQQYRDAPWANIQLTKDAETNFKMLLLNRVEAVFE 188

Query: 179 ERRTGLLFIEHLPGAQDIRALPTALSVDYLRVAVSRQSPLSQHMAEIDAQLQRMNQ 234
              T ++ ++ L   + +  L   L+     +   +   L+   A  D  +    Q
Sbjct: 189 NDLTAIMVLKKLNQLEQVTLLHPPLNETPAYITFPKAGKLAHSTALFDKAMADFKQ 244