Pairwise Alignments

Query, 260 a.a., Periplasmic amino acid-binding protein-related protein from Pseudomonas putida KT2440

Subject, 288 a.a., extracellular solute-binding protein family 3 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 52/192 (27%), Positives = 77/192 (40%), Gaps = 11/192 (5%)

Query: 29  DYPVYPPISWSDGHQVRGLAPTVVRELFARMGYEVQTVVLGNWKRCLMDAAAGRVDVVL- 87
           D+P Y   +   G    G    V+R   A +G E +   +  W R +     G+V  V  
Sbjct: 65  DWPPYVEHNLPHG----GYVARVIRAALASVGLEARFEFMP-WARGMSLLRDGKVTAVAP 119

Query: 88  AYNSDQRDQRMRFSTEPVMREEVAVFYNRKRPVQFQQLEDLAGYRGGLLYGESYGAEFDR 147
           AY +  R+     S  P     +A+F      + +  L DLAG R G++ G ++  +FD 
Sbjct: 120 AYRTVDREIECDLSA-PFPGGPLALFGLTPNALHWSDLRDLAGLRIGVVRGYAHTQDFD- 177

Query: 148 FVARHQNIERVSSSQQNFGKLIRGRIDYVIQERR-TGLLFIEHLPG-AQDIRALPTALSV 205
             A   + E  +    N  KL+  RID +  +R     L   HLP  A  +      L  
Sbjct: 178 -AAAFLSKEPANDELANLRKLLARRIDAMAADRNVVHFLLRRHLPAQAASLAEFDPILGE 236

Query: 206 DYLRVAVSRQSP 217
             L V  SR  P
Sbjct: 237 RDLHVCFSRARP 248