Pairwise Alignments

Query, 750 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  211 bits (538), Expect = 6e-59
 Identities = 147/406 (36%), Positives = 217/406 (53%), Gaps = 26/406 (6%)

Query: 218 MRRAILSDIERRERDRLELQDKRDELQAMVERRTASLARAKDEAEAANLAKSRFLATMSH 277
           + RAI SDIE +E           ELQ +VE RT  L  A+  AE AN +KS FLA MSH
Sbjct: 174 LERAI-SDIEHKE-----------ELQKLVEIRTRELRLAQKLAEQANQSKSNFLAMMSH 221

Query: 278 ELRTPLNGILGMAELLRGGRLEVADRQRVEALYKAGEGLLAILNEVLYFARLEEGESRAE 337
           ELRTPLN +LG+ ++LRG  L     + +E +  + E LL I+N++L  +R+E G     
Sbjct: 222 ELRTPLNAVLGLIDILRG-ELTSYQVELLEQMENSAELLLIIINDILDLSRIESGHFSLH 280

Query: 338 RVVFSLRQLCQEVLALLEPMAMENADTLQLQVDEQLAAYQYGAEQYLRQVLSNLLANAIK 397
                L +   + L     +A +      +Q ++      Y     L Q+L N++ NAIK
Sbjct: 281 CHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNKNPTLEYYTDSARLTQILFNIVGNAIK 340

Query: 398 FTEHGQVQLTVQVLANNECSQRLRLSVRDNGIGIEPAVQAKIFDRFVQASEAVTQRYGGT 457
           FT+ GQV + +    +      +   V+D GIGIE     ++F  F+QA  ++T+ YGGT
Sbjct: 341 FTKQGQVDVVLDYTKDG-----VVFRVKDTGIGIEKNRVEQLFTPFIQADNSITRNYGGT 395

Query: 458 GLGLAICKHLVEKLGGSIGLESVQGQGSCFWFELDMARG----QPVSAGSPAPSPLPSLD 513
           GLGLAI KHLVE +GG+I +ES  G G+ F   + +       +P ++ S     + +  
Sbjct: 396 GLGLAITKHLVELMGGTIQVESEFGIGTTFTLYIPLQSRLKNIKPSTSSSQQIVNVKNHH 455

Query: 514 ILVVEDVALNREVAGGLLMRDGHRVSFAEDASQALQACAQRR-FDLVLLDVHLPGMSGVA 572
           ILVVED   N+ V   LL + G+ V+ AE+  QA++   +   FDLVL+D+ +P M G+A
Sbjct: 456 ILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIA 515

Query: 573 LCRQLRSSPGPNRHSRILALTAGVQPGQVAGYLDAGMQGVLAKPLR 618
             + LR     +    I+ALTA          +DAGM  ++ KP+R
Sbjct: 516 ATKILRDK---HIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558