Pairwise Alignments

Query, 750 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  206 bits (523), Expect = 8e-57
 Identities = 132/387 (34%), Positives = 208/387 (53%), Gaps = 10/387 (2%)

Query: 246 MVERRTAS--LARAKDEAEAANLAKSRFLATMSHELRTPLNGILGMAELLRGGRLEVADR 303
           M ER+     L +AK+ A+A + AK  FLA MSHE+RTP+N ILGMA L     L+   R
Sbjct: 583 MTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQR 642

Query: 304 QRVEALYKAGEGLLAILNEVLYFARLEEGESRAERVVFSLRQLCQEVLALLEPMAMENAD 363
           + V  + ++ + LL I+N++L F+++E G+   ER+ F+L  +   V A++   A E   
Sbjct: 643 KYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGI 702

Query: 364 TLQLQVDEQLAAYQYGAEQYLRQVLSNLLANAIKFTEHGQVQLTVQVLANNECSQRLRLS 423
              + +D  +     G    L QV+ NL  NA+KFT  G++ L+ +V   NE    LR +
Sbjct: 703 EFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFA 762

Query: 424 VRDNGIGIEPAVQAKIFDRFVQASEAVTQRYGGTGLGLAICKHLVEKLGGSIGLESVQGQ 483
           V+D GIGI       +FD F QA  ++T++YGGTGLGL+I K LVE +GG I + S +G+
Sbjct: 763 VKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGK 822

Query: 484 GSCFWFE----LDMARGQPVSAGSPAPSPLPSLDILVVEDVALNREVAGGLLMRDGHRVS 539
           GS F F     L  A+ + +S   P    L    +LVV+D    R +   LL      V 
Sbjct: 823 GSTFEFSVVCGLQDAKMRDIS--QPVHG-LADKRVLVVDDNDSARHILDSLLTAMRFNVV 879

Query: 540 FAEDASQALQACAQRRFDLVLLDVHLPGMSGVALCRQLRSSPGPNRHSRILALTAGVQPG 599
              +  +AL    Q+ FD++ +D ++PGM+G+ L  ++++  G   H +   +TA  +  
Sbjct: 880 TVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTL-GLRGHMKSFLVTAYGREI 938

Query: 600 QVAGYLDAGMQGVLAKPLRLDSLRKAL 626
            + G     +  ++ KP+   +L  A+
Sbjct: 939 NLDGENSKLVDALIVKPVNPSNLLDAI 965



 Score = 82.8 bits (203), Expect = 1e-19
 Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 28/250 (11%)

Query: 514  ILVVEDVALNREVAGGLLMRDGHRVSFAEDASQALQACAQRRFDLVLLDVHLPGMSGVAL 573
            +L+VED  +N+EVA GLL   G  V  A    +AL+      FDLVL+D+ +P M G+  
Sbjct: 994  LLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITA 1053

Query: 574  CRQLRSSPGPNRHS-RILALTAGVQPGQVAGYLDAGMQGVLAKPLRLDSLRKAL------ 626
               +R++  P  HS  I+A+TA      +   L AGM   L+KP+ +D   + L      
Sbjct: 1054 TEHIRAN--PRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQV 1111

Query: 627  ------ADVAPGEVASAGADMDWSL-------LDTHRSLL----GEQKLQGLLKVLRQSL 669
                  +  +P + +++   M+  L       +D  +++      +Q+   +L+    S 
Sbjct: 1112 SDEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFIDSQ 1171

Query: 670  QQHATALAEALPAQDFTEVLHLAHRLAGSCDSLGFTGLATVLRGLEEAARQHDVQAMQAL 729
                 ++   + AQD++    +AH L GS  +LG   LA +   +E++  Q  + + + L
Sbjct: 1172 VDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSLEQQVLPSFELL 1231

Query: 730  --GEPLATQL 737
               + L TQ+
Sbjct: 1232 QQAQSLLTQV 1241