Pairwise Alignments

Query, 750 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1047 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  282 bits (722), Expect = 6e-80
 Identities = 220/623 (35%), Positives = 305/623 (48%), Gaps = 72/623 (11%)

Query: 164  LSGLFYRLVTRHLQVM----AEFARRIGA------GQWQEPLRLGRRRSSRPDEIDT--- 210
            L G+  RLV +HLQ +    A F  R+ A          E +RL   R    D I     
Sbjct: 434  LVGVDCRLVLQHLQGLCADGARFVPRVEAVVEDRRAVLGEEIRLADGRVLERDYIPIYLF 493

Query: 211  --VANALDDMRRA-ILSDIERRERDRLELQDKRDELQAMVERRTASLARAKDEAEAANLA 267
              VA   D      +  DI  R+   LELQ                  +AK+ AE+AN A
Sbjct: 494  PQVAQPEDYRGHLWLFRDITERKHAELELQ------------------QAKEAAESANRA 535

Query: 268  KSRFLATMSHELRTPLNGILGMAELLRGGRLEVADRQRVEALYKAGEGLLAILNEVLYFA 327
            K  FLA MSHE+RTP+NGILGM +L     L    R  +E +  + + LL I+N++L F+
Sbjct: 536  KGEFLANMSHEIRTPMNGILGMTDLALDSALTPEQRDYLEMVKSSADALLVIINDILDFS 595

Query: 328  RLEEGESRAERVVFSLRQLCQEVLALLEPMAMENADTLQLQVDEQLAAYQYGAEQYLRQV 387
            ++E G+   E + F LRQL +E L  LE  A + + TL+ +V E++A    G    LRQV
Sbjct: 596  KIEAGKLELEHIHFHLRQLLRETLKPLELRARQRSLTLRCEVPEEVADGYLGDPGRLRQV 655

Query: 388  LSNLLANAIKFTEHGQVQLTVQVLANNECSQRLRLSVRDNGIGIEPAVQAKIFDRFVQAS 447
            L NL+ NAIKFTE GQV + V+          L  +V D GIGI    Q  IF+ F QA 
Sbjct: 656  LINLVGNAIKFTEEGQVAVRVEAR-----DGLLHFAVSDTGIGIPADKQQLIFEAFSQAD 710

Query: 448  EAVTQRYGGTGLGLAICKHLVEKLGGSIGLESVQGQGSCFWF--ELDMARGQPVSAGSPA 505
             +VT+R+GGTGLGL IC  LV  +GG + +ES  GQGS F F   L+   G   S  + A
Sbjct: 711  SSVTRRFGGTGLGLTICTRLVRLMGGHMWVESDPGQGSTFHFTARLEAVAGPAESGEADA 770

Query: 506  ---PSPLPSLDILVVEDVALNREVAGGLLMRDGHRVSFAEDASQALQACAQRRFDLVLLD 562
                  LP L +LV ED  +N+++   LL + GHRV+ A++  QAL A A   FDLVL+D
Sbjct: 771  GRGEVVLPPLRLLVAEDNPVNQKLVLTLLQKRGHRVTLADNGQQALAALATDHFDLVLMD 830

Query: 563  VHLPGMSGVALCRQLRSSP---GPNRHSRILALTAGVQPGQVAGYLDAGMQGVLAKPLRL 619
            + +P M G+   R++R++    G  +H  I+A+TA    G     L+AGM G ++KPLR 
Sbjct: 831  MQMPVMGGLEATRRIRAAEAARGDGQHLPIVAMTANAMAGDRELCLEAGMDGYVSKPLRR 890

Query: 620  DSLRKALADVAP----------------GEVASAGADMDWSLLDTHR--------SLLGE 655
            D    A+ADV P                G+ A A A  + +     R         L G+
Sbjct: 891  DEFFSAMADVLPPERLRQAGAAAAIPADGQAAVAAAPSESAPAALRRCDRAEAVARLEGD 950

Query: 656  QKLQGLL-KVLRQSLQQHATALAEALPAQDFTEVLHLAHRLAGSCDSLGFTGLATVLRGL 714
            ++L  +L K+    L  +   L  AL  QD   +   AH L G   +        +   L
Sbjct: 951  EELFAMLVKMFSDDLPNYLQRLNAALAGQDMEALSREAHTLKGLLATFSAGRGTALALEL 1010

Query: 715  EEAARQHDVQAMQALGEPLATQL 737
            E  A+   V+ +  L   L  +L
Sbjct: 1011 ETRAKGGHVETLGVLVRQLQEEL 1033