Pairwise Alignments

Query, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 357 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  295 bits (755), Expect = 1e-84
 Identities = 150/363 (41%), Positives = 220/363 (60%), Gaps = 7/363 (1%)

Query: 4   VLKVIGGLLLASGASLAQAAEVGSGNTLRLYNWTDYIGETTLADFEKATGIKVIYDTFDG 63
           +LK I  LLL    S AQAA+     T+R+YNW+ YI   TL +F   TG +  YD +D 
Sbjct: 1   MLKSIFPLLLI--VSTAQAAD-----TVRIYNWSSYIAPDTLQNFTTQTGHQTQYDLYDS 53

Query: 64  YETVQTKLLTGRSGYDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQGYD 123
            E +  KL+ G SGYD+V  +   +   I+AG  + LD+ +LP+WHNL+  ++  L+  D
Sbjct: 54  NEVLDAKLMAGHSGYDVVFPSNHFMARQITAGALKPLDRSKLPNWHNLNPTLMKVLEAND 113

Query: 124 PGLKYSAPYTWGSSGVTYNVDKITARMPDAPIGSLAMLFDPKIVSRFADCGVTLMDAPTE 183
           PG +Y  PY WGS+G+ YNV K+ A + D PI S  ++F P+ + + A CGV ++D   E
Sbjct: 114 PGNRYGFPYLWGSTGIGYNVAKVKAVLGDVPIDSWDIVFKPENMKKLARCGVAMLDNGPE 173

Query: 184 VIPLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALTWSG 243
           ++P+AL YLG    S   AD + A+ LLL +RPY+  F +  Y + L  GDVCL + +SG
Sbjct: 174 ILPIALNYLGLPHHSKDKADYEKAQALLLKVRPYVSYFHNSKYTSDLATGDVCLVVGFSG 233

Query: 244 DYATAQARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQTMA 303
           D   A ARA EA    ++++ IP+EGS +WFD + +P DAP+    + F+ +LL P+ MA
Sbjct: 234 DVMQAAARANEAGNGQQIAYAIPKEGSPMWFDMVAMPADAPNEGAGYEFLNYLLDPKVMA 293

Query: 304 KVTDYIHYANSNAAATALVRDDIRQDPAIYPDAPTRERLFAQKTQSPRDMRAITRVWSTV 363
            +++++HYAN N AA  LV   IR DP +YP     ++LF  +     + R  TRVWS +
Sbjct: 294 GISNHVHYANGNTAAEGLVDKAIRNDPMVYPPDSVMKKLFVLEAMPLENDRLRTRVWSRI 353

Query: 364 KTG 366
           K+G
Sbjct: 354 KSG 356