Pairwise Alignments

Query, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 361 a.a., putrescine-binding periplasmic protein PotF from Phaeobacter inhibens DSM 17395

 Score =  306 bits (785), Expect = 4e-88
 Identities = 148/357 (41%), Positives = 224/357 (62%), Gaps = 3/357 (0%)

Query: 11  LLLASGASLAQAAEVGSGNTLRLYNWTDYIGETTLADFEKATGIKVIYDTFDGYETVQTK 70
           + L +  +L+ AA V     +R+YNW+DYI E  L  FE  TGI +IYD FD  E ++TK
Sbjct: 6   MTLTAIVALSSAAAVAE--EVRVYNWSDYIDEDLLEKFETETGIDLIYDVFDSNELLETK 63

Query: 71  LLTGRSGYDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQGYDPGLKYSA 130
           +L G SGYD+V+   S +   I AG FQ LD  +L +  N+   + +    YDP   YS 
Sbjct: 64  MLAGGSGYDVVVPTGSFLARQIQAGAFQKLDTSKLSNAGNMWDVIEDRTARYDPDNLYSV 123

Query: 131 PYTWGSSGVTYNVDKITARM-PDAPIGSLAMLFDPKIVSRFADCGVTLMDAPTEVIPLAL 189
            Y WG++G+  N  K+   +  DAPI SL ++F+P  + + A+CGV  +DAP E+IP AL
Sbjct: 124 NYMWGTTGIGANTAKVEEALGADAPIDSLELVFNPDNIEKLANCGVYFLDAPDEMIPAAL 183

Query: 190 QYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALTWSGDYATAQ 249
           +Y+G+DP S  P  +  AE +L+ IRPY++KF S  Y+ +L NGD+C+A  WSGD   A+
Sbjct: 184 KYIGEDPNSMDPDVVAKAEPVLMAIRPYVKKFHSSEYINALANGDICVAFGWSGDILQAR 243

Query: 250 ARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQTMAKVTDYI 309
            RA EA   +++ F  P+EG+L+WFD + IP DAP+   AH+F+ F+++ + MA  ++Y+
Sbjct: 244 DRADEADNGVEIVFNAPKEGALMWFDQMAIPVDAPNPDGAHKFLNFIMEAENMAAASNYV 303

Query: 310 HYANSNAAATALVRDDIRQDPAIYPDAPTRERLFAQKTQSPRDMRAITRVWSTVKTG 366
           +YAN N A+   + +D+  DPAIYP   T + L+ ++   P+  R  TR+W+ +K+G
Sbjct: 304 YYANGNKASQEFLEEDVIGDPAIYPSEETLKNLYIKEAYPPKVQRKATRMWTKIKSG 360