Pairwise Alignments

Query, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Klebsiella michiganensis M5al

 Score =  179 bits (453), Expect = 1e-49
 Identities = 112/340 (32%), Positives = 170/340 (50%), Gaps = 34/340 (10%)

Query: 12  LLASGASLA--QAAEVGSGNTLRLYNWTDYIGETTLADFEKATGIKVIYDTFDGYETVQT 69
           LLA+GA      AA      TL  YNWT+Y+    L  F K TGIKVIY T++  ET+  
Sbjct: 8   LLAAGALAVGMSAAHADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMYA 67

Query: 70  KLLTGRSG-YDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQGYDPGLKY 128
           KL T + G YDLV+ +   V  +   G+ Q +DK +L ++ NLD +++N  + +DP   Y
Sbjct: 68  KLKTYKDGAYDLVVPSTYFVDKMRKEGMLQKIDKSKLSNFGNLDPEMLN--KPFDPNNDY 125

Query: 129 SAPYTWGSSGVTYNVDKITARMPDAPIGSLAMLFDPKIVSRFADC-------GVTLMDAP 181
           S PY WG++ +  N D+I                DPK V+ +AD         + L D  
Sbjct: 126 SIPYIWGATAIGINSDEI----------------DPKTVTSWADLWKPEYKSSLLLTDDA 169

Query: 182 TEVIPLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALTW 241
            EV  +AL+ LG    +  P +++AA   L  + P +  F+S N       G+V L + W
Sbjct: 170 REVFQVALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMVW 229

Query: 242 SGDYATAQARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQT 301
           +G    A+           L    P+EG + W D+L IP +A +   A + I FLL+P+ 
Sbjct: 230 NGSAWVARQAGTP------LEVVWPKEGGIFWMDSLSIPANAKNVDGALKLINFLLRPEI 283

Query: 302 MAKVTDYIHYANSNAAATALVRDDIRQDPAIYPDAPTRER 341
             +V + I Y   N AA  ++  ++  D ++YPDA T ++
Sbjct: 284 AKQVAETIGYPTPNLAARKMLSPEVANDKSLYPDAATIQK 323