Pairwise Alignments

Query, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 370 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Klebsiella michiganensis M5al

 Score =  323 bits (828), Expect = 5e-93
 Identities = 159/362 (43%), Positives = 233/362 (64%), Gaps = 7/362 (1%)

Query: 7   VIGGLLLASGASLAQAAEVGSGNTLRLYNWTDYIGETTLADFEKATGIKVIYDTFDGYET 66
           V G L+  S  SLA   +     TL +YNW+DYI   T+A+FEK TGIKV+YD FD  E 
Sbjct: 13  VTGALMAVSAGSLAAEQK-----TLHVYNWSDYIAPDTVANFEKETGIKVVYDVFDSNEV 67

Query: 67  VQTKLLTGRSGYDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQGYDPGL 126
           ++ KL+ G +G+DLV+ +AS +   ++AGVFQ LDK +LP+W NLD +V+  +  +DP  
Sbjct: 68  LEGKLMAGSTGFDLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKHDPDN 127

Query: 127 KYSAPYTWGSSGVTYNVDKITARM-PDAPIGSLAMLFDPKIVSRFADCGVTLMDAPTEVI 185
           KY+ PY W ++G+ YN+DK+ A +  DAP+ S  ++  P+ + +   CGV+ +DAP E+ 
Sbjct: 128 KYAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPEEIF 187

Query: 186 PLALQYLGKDPRSASPADLKA-AEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALTWSGD 244
              L YLGKDP S+   D    A  LLL +RP IR F S  Y+  L NGD+C+A+ W+GD
Sbjct: 188 ATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGD 247

Query: 245 YATAQARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQTMAK 304
              A  RA EAK  + +S+FIP+EG+L +FD   +P DA +   A++F+ +L++P  +A 
Sbjct: 248 VWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAH 307

Query: 305 VTDYIHYANSNAAATALVRDDIRQDPAIYPDAPTRERLFAQKTQSPRDMRAITRVWSTVK 364
           ++D+++YAN N A+  LV ++IR +PAIYP A    +LF  K Q P+  R  TR W+ VK
Sbjct: 308 ISDHVYYANGNKASLPLVSEEIRNNPAIYPPADVFAKLFTLKVQDPKIDRVRTRAWTKVK 367

Query: 365 TG 366
           +G
Sbjct: 368 SG 369