Pairwise Alignments

Query, 503 a.a., diguanylate cyclase from Pseudomonas putida KT2440

Subject, 1258 a.a., Serine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  234 bits (598), Expect = 1e-65
 Identities = 161/514 (31%), Positives = 257/514 (50%), Gaps = 46/514 (8%)

Query: 11   YRLLIQSVVDYAIYLLTPEGIVANW-NPGAQRAKGYRAEEIVGQHYSLFYTDAERAAGLP 69
            YR+L +S+ D  +   T   +  N+ +P  Q   GY A+ I    +     + ++  G+ 
Sbjct: 564  YRMLAESISD--VIFSTDNKLSLNYVSPSVQAVLGYTADWIFQNGWQSIIANPQQLTGIY 621

Query: 70   AFNLEQARSTGRFEETGAR-------------LRKDGTAFHAHVVIEAVYDDAGQLVGFA 116
            +     +++  + ++                 LR DG      + +  V+D+ G   G  
Sbjct: 622  SLMDRVSKALDKPDQLAELRNQMQTQLFLFDCLRADGRKIPIELRLVLVWDEHGAFEGVL 681

Query: 117  KVTRDISERHRQELELLQAKELAEQYSQEMAKLSQFLDSVIANIPASVIVQDLESQRILL 176
             V RDIS++ R E +L  A  + E  +           +++   PA  IVQ         
Sbjct: 682  GVGRDISQQRRAEKDLRMAATVFEHSTS----------AILITDPAGYIVQ--------- 722

Query: 177  ANQQAERLFGGPQHSMIGQLPRECLAPAAGD----YLEQQFVRGARSTKGHAAETRVDTA 232
            AN+   R+ G     ++ QLP         +    Y+ +Q  + + + +G     R +  
Sbjct: 723  ANEAFSRVSGYAVSQVLDQLPNMLTVDEQQEAHLRYVLKQLQQHS-TWEGEVWLKRRNGE 781

Query: 233  RGPRTLRSRTLLSQNREGQADYVLFVAEDATEELAAHAQIHHMAHHDALTGLPNRTLFHE 292
              P  +    +L    +  A YV F + D +E  A+  +IH +A++DALT LPNRTLF +
Sbjct: 782  HYPAWVGITAVLDDEGD-LASYVCFFS-DISERKASEQRIHRLAYYDALTHLPNRTLFQD 839

Query: 293  RLRQALLRGSENAKLTAALCLDLDNFKNINDSLGHAFGDKLLRELGKRLRRELREHDTLA 352
            RL  AL            + LDLD FK INDSLGHA GD++L+E+  RL   + + DT+A
Sbjct: 840  RLHTALQSADRQKTWVVLMFLDLDRFKPINDSLGHAAGDRMLKEMATRLLGCVADDDTVA 899

Query: 353  RLGGDEFAVVLTGLEGRDAACN----TAQRLIKAISPPFRIEGHQFAVGVSIGIAIAPDD 408
            R+GGDEF ++L     R+ A N     A++++ ++  PF +EG +F V  SIGIA++P D
Sbjct: 900  RMGGDEFTLLLQPRASREMALNRAINVAEQILASLVRPFVLEGREFFVTASIGIALSPQD 959

Query: 409  HDQAEQLLGYADMALYQAKRNGRNRYECFDVELDVAARQRRLVETDLRTALHLGQLQLHY 468
             ++  QL+  AD A+Y AK  G+N ++ +  +++ +A +R  +E+DLR AL   +  L+Y
Sbjct: 960  GNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALERLELESDLRHALEQNEFVLYY 1019

Query: 469  QPVVDHQTSSVTGYEALLRWEHPTRGMVMPMDFI 502
            QP        +TG EALLRW HP RG+V P DFI
Sbjct: 1020 QPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFI 1053



 Score = 32.0 bits (71), Expect = 1e-04
 Identities = 44/210 (20%), Positives = 88/210 (41%), Gaps = 12/210 (5%)

Query: 70  AFNLEQARSTGRFEETGARLRKDGTAFHAHVVIEAVYDDA-GQLVGFAKVTRDISERHRQ 128
           A+ L   + T      G++L +     H  + +E    DA G+      V R   ++   
Sbjct: 345 AWQLLVGKGTQDNNPVGSKLLEALLDQHKQLELEIKLQDAHGRDQHLWLVLRLPEKQQDH 404

Query: 129 ELELLQAKELAEQYSQEMAKLSQ--FLDSVIANIPASVIVQDLESQRILLANQQAERLFG 186
              +L   ++  +   E++ L +  F   V+  +P  + VQD+ SQR++ +N    +  G
Sbjct: 405 NAVILSISDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGQTLG 464

Query: 187 GPQHSM--IGQLPRECLAPAAGDYLEQQFVRGARSTKGHAAETRVDTARGPRTLRSRTL- 243
             +  +  +G+   E L   + D      +R A+   G+    +       R  + R   
Sbjct: 465 YDRTELHQMGEYFWEILL-HSDDADHYHSLRQAQRRGGYTQLLQCQLRFRHRNGKWRCFD 523

Query: 244 -----LSQNREGQADYVLFVAEDATEELAA 268
                L+++R+ Q   ++ VA+D TE++ A
Sbjct: 524 IREQALARDRDNQVTRIIGVAKDVTEQIEA 553



 Score = 25.8 bits (55), Expect = 0.010
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 402 IAIAPDDHD------QAEQLLGYADMALYQAKRNGRN-RYECFDVELDVAARQR 448
           I +  DD D      QA++  GY  +   Q +   RN ++ CFD+     AR R
Sbjct: 480 ILLHSDDADHYHSLRQAQRRGGYTQLLQCQLRFRHRNGKWRCFDIREQALARDR 533