Pairwise Alignments

Query, 503 a.a., diguanylate cyclase from Pseudomonas putida KT2440

Subject, 1247 a.a., sensory box/GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  219 bits (558), Expect = 5e-61
 Identities = 139/387 (35%), Positives = 201/387 (51%), Gaps = 22/387 (5%)

Query: 118  VTRDISERHRQELELLQAKELAEQYSQEMAKLSQFLDSVIANIPASVIVQDLESQRILLA 177
            + RDI+ERH  + +L QA  + E  ++                   V++ D + Q I   
Sbjct: 667  IARDITERHLMQEKLQQAATVFESTAE------------------GVLITDTQ-QHISAV 707

Query: 178  NQQAERLFGGPQHSMIGQLPRECLAPAAGDYLEQQFVRGARSTKGHAAETRVDTARGPRT 237
            N+    + G  +   +G  PR  LA    D      +    + +GH      +  +    
Sbjct: 708  NRAFTEITGYSETEALGHTPR-LLASGLHDSAFYAAMWHQLTAEGHWQGEISNRRKNGEL 766

Query: 238  LRSRTLLS--QNREGQADYVLFVAEDATEELAAHAQIHHMAHHDALTGLPNRTLFHERLR 295
              S   +S  +NR+ Q  + + V  D +    A A++ + AHHD LTGLPNRTLF  RL 
Sbjct: 767  YPSWLTISAVRNRDRQITHFVAVFADISSLKHAQARLDYQAHHDPLTGLPNRTLFESRLL 826

Query: 296  QALLRGSENAKLTAALCLDLDNFKNINDSLGHAFGDKLLRELGKRLRRELREHDTLARLG 355
             AL    EN    A L LDLD FK+INDSLGH  GD LL+ +  RLR +LR+ DT+ARLG
Sbjct: 827  AALNGQQENGSQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAVRLREQLRDIDTVARLG 886

Query: 356  GDEFAVVLTGLEGRDAACNTAQRLIKAISPPFRIEGHQFAVGVSIGIAIAPDDHDQAEQL 415
            GDEF ++L GL+    A + AQ+L+   + PF+   H+F +  SIG ++ P D      L
Sbjct: 887  GDEFIILLPGLQQPSDAEHIAQKLLNCFAAPFQAGEHEFFISASIGTSLYPQDGCDVATL 946

Query: 416  LGYADMALYQAKRNGRNRYECFDVELDVAARQRRLVETDLRTALHLGQLQLHYQPVVDHQ 475
            +  AD A+Y++K  GRNR E +  +L   A +R  +E +LR A+   +L L +QP +   
Sbjct: 947  VKNADAAMYRSKAKGRNRVESYTRDLTAQASERVALEHELRRAIERNELSLSFQPKISLV 1006

Query: 476  TSSVTGYEALLRWEHPTRGMVMPMDFI 502
             + + G EAL+RW HPT G V P  FI
Sbjct: 1007 DNQLVGAEALIRWTHPTFGDVPPEHFI 1033



 Score = 28.5 bits (62), Expect = 0.001
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 12/132 (9%)

Query: 8   DIMYRLLIQSVVDYA--IYLLTPEGI--------VANWNPGAQRAKGYRAEEIVGQHYSL 57
           DI  R L+Q  +  A  ++  T EG+        ++  N       GY   E +G    L
Sbjct: 670 DITERHLMQEKLQQAATVFESTAEGVLITDTQQHISAVNRAFTEITGYSETEALGHTPRL 729

Query: 58  FYTDAERAAGLPAFNLEQARSTGRFEETGARLRKDGTAFHAHVVIEAVYDDAGQLVGFAK 117
             +    +A   A    Q  + G ++   +  RK+G  + + + I AV +   Q+  F  
Sbjct: 730 LASGLHDSAFYAAM-WHQLTAEGHWQGEISNRRKNGELYPSWLTISAVRNRDRQITHFVA 788

Query: 118 VTRDISE-RHRQ 128
           V  DIS  +H Q
Sbjct: 789 VFADISSLKHAQ 800