Pairwise Alignments

Query, 335 a.a., AraC family transcriptional regulator from Pseudomonas putida KT2440

Subject, 314 a.a., putative HTH-type transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score =  132 bits (331), Expect = 1e-35
 Identities = 95/301 (31%), Positives = 145/301 (48%), Gaps = 11/301 (3%)

Query: 25  LILPNFTTIGLASAVETLRMANLAARKPLYRSVLIAADDAPVVASNGMRVLPDYNITNAP 84
           L+   F+   LA+ VE LR AN  A + +Y    +  D    ++S  M V     +  A 
Sbjct: 17  LLFDQFSGHCLANTVEPLRAANTLAGRQVYSWRFVTVDGGTAMSSARMEVTAQMPLHKAE 76

Query: 85  ALDALLVVGANPIDRSRSNRPLIDWLRQLARQRLPLGGICTGSYLLAKAELLKGYRCTIH 144
             D L+ + +    R  +       LR   ++   L G  TG++LLA A LL GYR TIH
Sbjct: 77  G-DMLIAMPSYGYLR-HTTEATARGLRAAQQRYGVLAGFDTGAWLLAAAGLLDGYRATIH 134

Query: 145 WEDLPTLQAHFPGIVISSQLFELDRDRYTCSGGVAAMDMMLQLVARDTGGQDIAAKAAEL 204
             ++      FP +   +  F  DRDR T SG +AA D +L ++A+  G Q +    A L
Sbjct: 135 SSEMEAFADMFPAVQAETHRFLWDRDRLTSSGAMAAFDGILDMIAQQHG-QALRLDVAAL 193

Query: 205 LLCDRVRGERERQRVPLRTLLGSAQPKLSQVVAIMEANLEEPLGLEELASLNDVTVRQLE 264
            L +   G       P+R+        +++ +  MEANLE PL LEE+A     ++R L 
Sbjct: 194 FLSESQSGSDRSS--PVRSA------SVARAIRAMEANLETPLPLEEVARHAGRSLRDLA 245

Query: 265 RLFHKYLQRTPSQYYLELRLSRARELLLRSDVQVREVALACGFSSPAHFSKSYSRFFGLS 324
           R     L  TP   Y  LRL +A+ L+L +D  V E+A+ CG+  P+  ++++   F  +
Sbjct: 246 RRTRGELGTTPQALYRHLRLKQAKRLVLETDFSVAEIAVRCGYEDPSALTRAFRSAFATT 305

Query: 325 P 325
           P
Sbjct: 306 P 306