Pairwise Alignments

Query, 404 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 386 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  221 bits (562), Expect = 4e-62
 Identities = 137/359 (38%), Positives = 190/359 (52%), Gaps = 32/359 (8%)

Query: 36  GFKQVVLLLVGTALGLTLYHAAFGFTSAWRVFINERRGAGLRAQMVMLTLAVLLFFPALS 95
           G +Q +LLL+G A+G  LYH  FGF+S +R  +  + G    AQ+ +L L  + F    S
Sbjct: 39  GGRQTMLLLLGAAIGAVLYHGRFGFSSGFRKLLQRQDGNPALAQLWLLALTSIAFAGVFS 98

Query: 96  AGSLFGNPVTGLVAPAGVSVVFGAFIFGIGMQLGGGCASGTLFTVGGGNARMLVTLLFFV 155
              L G  +   +AP G + + GAF+FGIGMQL   C  GTL  VGGG+  +L+TL+ F 
Sbjct: 99  LAELRGWELRPAIAPVGWASLGGAFLFGIGMQLSRACGCGTLAAVGGGSYNLLITLIAFG 158

Query: 156 IGSVSATHHADWWFALPSLPATSIVQVWGIGPAVLASLAVFGLIA-----WATVVLEKRR 210
           IG+  AT     W  LP+    S     G G A+L  L +  ++A     WA + + K R
Sbjct: 159 IGAFGATLTRPLWSQLPAWEPWSFASQLGWGSALLLQLWLLLILAVALWRWAPLPMVKSR 218

Query: 211 HGALEALPASEHQGLRRFLRGPWPLLW-GAIALALLNYATLALAGRPWGITSAFALWGAK 269
                                    LW  A A+ALL   TL + G+PW +T   AL  A+
Sbjct: 219 R------------------------LWLAATAIALLYTGTLVVDGQPWRVTWGLALTTAQ 254

Query: 270 VLSGLGVDVGSWVFWQAPANAKALAAPLWQDITTVMDLGIVLGALLAAGLAGRFAPNLKI 329
           V   LG D  S VFW        L++ L  D + + DLG++LGAL AA   GR+     +
Sbjct: 255 VAQNLGWDPQSSVFWGRQLG--RLSSSLLADPSVITDLGLILGALTAAAYEGRWRWQGSL 312

Query: 330 PLPSLVAAVIGGLLLGYGSRLAYGCNIGAYFSGIASGSLHGWLWLVAAYTGNLIGVRLR 388
              ++  ++ GGL +G+G+ LA GCNI AY +GIAS SLHGW+WLVAA  G+ +G+ LR
Sbjct: 313 QPHAVGLSIAGGLSMGFGAFLAAGCNISAYLAGIASTSLHGWVWLVAALLGSWVGIHLR 371