Pairwise Alignments

Query, 306 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  153 bits (386), Expect = 5e-42
 Identities = 92/292 (31%), Positives = 155/292 (53%), Gaps = 5/292 (1%)

Query: 10  DELATLLALYEQGSFAAAGRQLERHPTVLSKRLSALETRLGIRLVERSTRQLRFTDEGER 69
           D ++  +A+ E  +F  A ++L      +S+++ ALE RLG +L  R+TR++  T+EG  
Sbjct: 5   DGISEFVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTI 64

Query: 70  LVAKVLEASRLIAEAEEEAAEGAATVRGRLRLALPAAMGRRWLSGMLADFVLAYPQVIVE 129
                 +    + EAE    +   + +G ++L  P A G +++  +L DF++ YP V   
Sbjct: 65  YYRHCRQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECN 124

Query: 130 TEYADRFVDLIGEGFDAAIRIGELADNRLVASKLCDHVRILCASPQYLARHGEPAQPEDL 189
            +  +R +DLI  G+D AIR+G+LAD+ L+A  L      + ASP Y+ ++GEP    +L
Sbjct: 125 VDLTNRTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSEL 184

Query: 190 AAHNCLGFNGLRSFPEWRLMSDTRQTSVKVAGSLRSNDNEALLEAARRGVGIVAGGDWLM 249
             HNCL    + +   WR +   R+ + KV G L  N   AL +AA +G+GIV   D+ +
Sbjct: 185 NQHNCL----IGNHNYWRFIEHGRERNFKVRGKLICNSGYALRDAALKGIGIVQLPDYYI 240

Query: 250 GEDLASGCLVRVLAQWQLDKAAGIYLVRPTARLNTAAMGVFKAWLEDRFKAG 301
            ED+ +G L+  L     +   GI+ + P  R  +A + V   +L ++   G
Sbjct: 241 EEDIHAGRLISFL-DTHREAKEGIWALYPQNRHLSAKVRVLVDYLAEKLTGG 291