Pairwise Alignments

Query, 260 a.a., L-lysine and D-lysine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

Subject, 251 a.a., amino-acid transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  309 bits (792), Expect = 3e-89
 Identities = 149/257 (57%), Positives = 193/257 (75%), Gaps = 7/257 (2%)

Query: 4   PLSLATLAPEPDPRPVLIRIEGLNKHYGAFHVLRDIDLQVREGERIVLCGPSGSGKSTLI 63
           P S+   +PE       I + G++K YG +H L DI+L +   E++V+CGPSGSGKSTLI
Sbjct: 2   PTSIDIASPE-------ITLSGVHKWYGQYHALDDINLSIASREKVVICGPSGSGKSTLI 54

Query: 64  RCINRLEVAQQGSIQVDGIDLAATTREAAQVRSDIGMVFQHFNLFPHMSVLDNCLLAPTS 123
           RC+NRLE  QQG I V G+++    R+   +R ++GMVFQ FNLFPH+++L+NC+LAP  
Sbjct: 55  RCVNRLEAHQQGRIVVGGVEVGEDERKVDAIRREVGMVFQQFNLFPHLTILENCILAPMW 114

Query: 124 VRGLSRKDAEERARMYLSKVGIESQAHKYPSQLSGGQQQRVAIARALCMKPRIMLFDEPT 183
           V+ + R  A E A  YL++V I  QA+KYP QLSGGQQQRVAIARALCM P++MLFDEPT
Sbjct: 115 VKRMPRAQATEIAMDYLNRVRIPEQANKYPGQLSGGQQQRVAIARALCMNPKVMLFDEPT 174

Query: 184 SALDPEMVAEVLDVLVQLAGTGMTMLCVTHEMGFARQVAERVLFLEGGQIIEDSPPQVFF 243
           SALDPEMV EVLD +V LA  GMTM+CVTHEMGFARQVA+RV+F++ G+I+E+  P  FF
Sbjct: 175 SALDPEMVKEVLDTMVALANDGMTMVCVTHEMGFARQVADRVIFMDQGRIVEEGEPDEFF 234

Query: 244 NQPRTERAKAFLAQILH 260
             P+T+RA  FL+Q+LH
Sbjct: 235 AHPKTDRASLFLSQLLH 251